CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93541	Sorghum	cytosol	78.5	77.44
HORVU4Hr1G074380.1	Barley	cytosol	36.18	76.26
Os03t0724100-01	Rice	cytosol	75.77	74.25
TraesCS4D01G055200.1	Wheat	cytosol	72.35	72.6
TraesCS4A01G259700.1	Wheat	cytosol	72.01	72.26
TraesCS4B01G055000.1	Wheat	cytosol	72.01	72.26
HORVU4Hr1G009210.2	Barley	cytosol	71.33	71.58
TraesCS4D01G055100.1	Wheat	cytosol	50.51	70.81
TraesCS4A01G259600.1	Wheat	cytosol	69.62	69.86
TraesCS4B01G055100.1	Wheat	cytosol	67.24	69.61
TraesCS4D01G055300.1	Wheat	cytosol	69.28	69.52
HORVU4Hr1G005090.2	Barley	cytosol	30.72	69.23
HORVU4Hr1G009190.1	Barley	cytosol	68.94	69.18
KXG37681	Sorghum	cytosol	72.7	68.93
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	32.42	68.35
HORVU5Hr1G114590.3	Barley	mitochondrion	28.33	68.03
TraesCS4A01G259500.1	Wheat	cytosol	67.58	67.81
HORVU4Hr1G009310.1	Barley	cytosol	66.55	66.78
TraesCS4D01G055400.1	Wheat	cytosol	66.55	66.78
TraesCS7B01G089700.1	Wheat	cytosol	63.48	65.72
TraesCS4B01G055200.1	Wheat	cytosol	65.19	65.41
GSMUA_AchrUn_...	Banana	cytosol	61.09	62.81
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	33.11	62.18
HORVU5Hr1G020290.3	Barley	plastid	32.08	61.44
GSMUA_Achr4P03190_001	Banana	cytosol	58.36	61.07
KRH51858	Soybean	nucleus, plastid	41.3	59.61
KRH61179	Soybean	cytosol	36.18	58.56
KRH15219	Soybean	cytosol	57.0	58.39
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	57.34	57.93
PGSC0003DMT400038571	Potato	cytosol	52.56	57.46
Solyc02g085300.2.1	Tomato	cytosol	42.32	57.41
GSMUA_Achr8P26360_001	Banana	cytosol	57.68	56.9
CDX73146	Canola	cytosol	55.63	56.4
KRH05807	Soybean	cytosol	56.31	56.31
Solyc12g089130.1.1	Tomato	cytosol	44.37	55.79
AT1G75170.1	Thale cress	cytosol	56.31	55.74
KRH08288	Soybean	cytosol	54.61	54.05
KRH69927	Soybean	cytosol	54.27	53.72
PGSC0003DMT400013200	Potato	cytosol	52.22	53.31
Solyc04g080290.2.1	Tomato	cytosol	51.88	52.96
CDY24776	Canola	cytosol	52.9	52.9
Bra010566.1-P	Field mustard	cytosol	52.9	52.9
CDY65854	Canola	nucleus	51.88	52.6
CDY35466	Canola	cytosol	52.56	52.56
Bra011696.1-P	Field mustard	nucleus	51.88	52.41
VIT_18s0001g12420.t01	Wine grape	cytosol	55.63	51.75
AT4G36640.3	Thale cress	cytosol	50.85	50.68
Bra017768.1-P	Field mustard	cytosol	49.83	50.52
CDX72592	Canola	cytosol	49.83	50.52
CDY42697	Canola	cytosol	49.83	50.52
CDX75583	Canola	cytosol	24.91	46.5
Bra015863.1-P	Field mustard	cytosol	55.97	42.71
CDY45413	Canola	cytosol	55.97	42.6
EES02732	Sorghum	cytosol	43.0	39.87
EES17948	Sorghum	cytosol	31.06	33.7
KXG23351	Sorghum	cytosol	31.4	32.17
EES05517	Sorghum	cytosol	38.23	32.0
EES02002	Sorghum	cytosol	25.26	29.02
OQU79005	Sorghum	cytosol	29.35	28.96
EER90511	Sorghum	cytosol	24.57	28.8
EES02004	Sorghum	cytosol	23.21	27.64
KXG19106	Sorghum	plastid	18.43	21.09
EER95261	Sorghum	cytosol	23.21	15.32

Protein Annotations

EnsemblPlants:KXG37682	EnsemblPlantsGene:SORBI_3001G108700	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	ProteinID:KXG37682	ProteinID:KXG37682.1	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0003C7099E	UniProt:A0A1B6QIC6	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:8432095..8436229

Molecular Weight (calculated)

33874.4 Da

IEP (calculated)

7.657

GRAVY (calculated)

-0.478

Length

293 amino acids

Sequence
(BLAST)

001: MFRRKHASHF DSNDADQRKA KIAELKSALE PLSARSEKYC SEACLTRYLE ARNWNVAKSR KMLEDSLKWR AAYRPEDIRW PEVSVEGETG KMYRASFRDR
101: EGRTIVVMRP AKQNTSSHEG QIRFLAYSLE NAILSLPEGQ EKMVWLIDFT GWTMANAVPI KTARETVNIL QNHYPERLAI AFLFNPPKVF EAFWKVVKYF
201: VDLRTIEKVK FVYPKDEESM KVIHKFIDPE VLPIEFGGKS SVVYNHEEYS ELMTKDDTKI SSFWATDAQT DHVNHVIDGT LAPEVTPVVT ANC

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.