CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040360_P001	Maize	cytosol	92.72	92.72
TraesCS3B01G211200.1	Wheat	nucleus	78.16	81.79
Os01t0264700-01	Rice	cytosol	80.38	81.67
TraesCS3D01G186000.2	Wheat	nucleus	77.53	80.86
TraesCS3A01G181100.2	Wheat	nucleus	77.53	80.86
HORVU3Hr1G037050.3	Barley	nucleus	77.53	75.38
GSMUA_Achr8P01630_001	Banana	cytosol	55.38	50.29
GSMUA_Achr10P...	Banana	nucleus	56.01	46.46
EES17948	Sorghum	cytosol	37.34	43.7
KXG37682	Sorghum	cytosol	39.87	43.0
EES05517	Sorghum	cytosol	47.47	42.86
GSMUA_Achr9P17070_001	Banana	cytosol	55.7	42.51
EER93541	Sorghum	cytosol	39.87	42.42
KXG23351	Sorghum	cytosol	38.29	42.31
OQU79005	Sorghum	cytosol	38.61	41.08
KXG37681	Sorghum	cytosol	37.66	38.51
EES02004	Sorghum	cytosol	20.57	26.42
EER90511	Sorghum	cytosol	20.89	26.4
EES02002	Sorghum	cytosol	20.89	25.88
KXG19106	Sorghum	plastid	18.04	22.27
EER95261	Sorghum	cytosol	21.84	15.54

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:8085831	UniProt:C5XGI0	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlants:EES02732	ProteinID:EES02732	ProteinID:EES02732.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR10174	PANTHER:PTHR10174:SF159	SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3003G121800	SUPFAM:SSF46938
SUPFAM:SSF52087	unigene:Sbi.5898	UniParc:UPI0001A84EA2	RefSeq:XP_002457612.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:11105867..11111121

Molecular Weight (calculated)

35914.2 Da

IEP (calculated)

5.344

GRAVY (calculated)

-0.689

Length

316 amino acids

Sequence
(BLAST)

001: MSFLFKSSNG GTTEKTMPLE EQQEKINELR KVLGDHSSPA IQDFLSDASL ARFLRARNWN VQKASKMMKA AVKWRLAFKP ENICWDDISE EAETGKIYRA
101: DYKDKHGRTV LVLRPGLENT TSATGQIKYL VYSLEKAIMN LTEDQEKMVW LTDFQSWTLG STPLKVTRET VNVLQDCYPE RLGLAILYNP PRIFESFWKI
201: VKPFLDQETR KKVKFVYSND KESQKIMAEV FDMEELDSAF GGKNPATFEY NSYAERMQED DKKMGSLHSS TNSLLESAEK EANGADSDAS SEASFYSGTD
301: SPKHEDGEHS IAKKSG

Best Arabidopsis Sequence Match ( AT1G22180.4 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.