Factsheet for Os01t0264700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02732	Sorghum	cytosol	81.67	80.38
Zm00001d040360_P001	Maize	cytosol	81.67	80.38
TraesCS3B01G211200.1	Wheat	nucleus	76.21	78.48
TraesCS3D01G186000.2	Wheat	nucleus	75.88	77.89
TraesCS3A01G181100.2	Wheat	nucleus	75.56	77.56
HORVU3Hr1G037050.3	Barley	nucleus	76.21	72.92
GSMUA_Achr8P01630_001	Banana	cytosol	56.27	50.29
GSMUA_Achr10P...	Banana	nucleus	55.95	45.67
Os05t0267800-01	Rice	cytosol	41.16	45.23
GSMUA_Achr9P17070_001	Banana	cytosol	58.2	43.72
Os03t0724100-01	Rice	cytosol	39.55	41.14
Os02t0752000-01	Rice	cytosol	46.3	38.1
Os03t0850700-01	Rice	cytosol	20.9	24.9
Os01t0926800-01	Rice	cytosol, mitochondrion	19.61	24.7
Os02t0321500-01	Rice	mitochondrion	16.72	19.92
Os03t0219100-01	Rice	cytosol	21.54	15.3

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	ProteinID:BAD81182.1	ProteinID:BAD81256.1	ProteinID:BAF04579.1	ProteinID:BAS71454.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	EnsemblPlantsGene:Os01g0264700	EnsemblPlants:Os01t0264700-01	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF159	UniProt:Q5NBA0	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000049E6BA	:	:	:

Description

Cellular retinaldehyde binding/alpha-tocopherol transport family protein. (Os01t0264700-01)

Coordinates

chr1:-:9004534..9008221

Molecular Weight (calculated)

35461.8 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.637

Length

311 amino acids

Sequence
(BLAST)

001: MSFLFKSSNG ATTEKNLTLE EQQEKINDLR KELGEHSSEE IQDFLSDASC LRFLRARNWN VQKASKMMKS AVKWRVSYMP QKINWDDVAH EAETGKIYRA
101: DYKDKHGRTV LVLRPGLENT TSGKGQIKYL VYCLEKAIMS LTEDQEKMVW LTDFQSWTLG STPLKVTRET VNVLQDCYPE RLGLAILYNP PRIFESFWKI
201: VKPFLDHETY KKVKFVYSSD KESQKIMADV FDLDKLDSAF GGRNPATFEY NSYAERMRAD DIKMGSSFKS NGITLPQDHS HVSADKEANG GGSDASSEAS
301: FYSGTDSPLR A

Best Arabidopsis Sequence Match ( AT1G22180.4 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.