Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24776 | Canola | cytosol | 86.73 | 87.03 |
| Bra010566.1-P | Field mustard | cytosol | 86.73 | 87.03 |
| CDY35466 | Canola | cytosol | 85.37 | 85.67 |
| Bra011696.1-P | Field mustard | nucleus | 82.65 | 83.79 |
| CDY65854 | Canola | nucleus | 80.61 | 82.01 |
| CDX75583 | Canola | cytosol | 40.14 | 75.16 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 65.65 | 66.55 |
| Solyc02g085300.2.1 | Tomato | cytosol | 46.94 | 63.89 |
| KRH08288 | Soybean | cytosol | 64.29 | 63.85 |
| KRH69927 | Soybean | cytosol | 64.29 | 63.85 |
| PGSC0003DMT400038571 | Potato | cytosol | 57.48 | 63.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.8 | 58.6 |
| AT1G75170.1 | Thale cress | cytosol | 56.8 | 56.42 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 51.36 | 53.93 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 54.42 | 53.87 |
| Zm00001d033836_P001 | Maize | nucleus | 52.72 | 52.54 |
| EER93541 | Sorghum | cytosol | 51.7 | 51.18 |
| KXG37682 | Sorghum | cytosol | 50.68 | 50.85 |
| KXG37681 | Sorghum | cytosol | 51.7 | 49.19 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 48.64 | 48.97 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 48.64 | 48.97 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 48.3 | 48.63 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 22.79 | 48.2 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 47.62 | 47.95 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 47.62 | 47.95 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 47.28 | 47.6 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 47.28 | 47.6 |
| Os03t0724100-01 | Rice | cytosol | 47.96 | 47.16 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 46.6 | 46.92 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 46.26 | 46.58 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 46.26 | 46.58 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 20.41 | 46.15 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 44.22 | 45.94 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 32.65 | 45.93 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 45.58 | 45.89 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 43.88 | 45.58 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 21.09 | 44.6 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 18.03 | 43.44 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 22.11 | 41.67 |
| AT4G08690.2 | Thale cress | cytosol | 41.5 | 40.53 |
| AT1G22180.4 | Thale cress | cytosol | 43.2 | 40.45 |
| Zm00001d033837_P001 | Maize | plastid | 40.82 | 40.27 |
| HORVU5Hr1G020290.3 | Barley | plastid | 20.75 | 39.87 |
| AT5G63060.1 | Thale cress | plastid | 20.75 | 23.19 |
| AT1G01630.1 | Thale cress | cytosol | 20.07 | 23.14 |
| AT1G14820.3 | Thale cress | cytosol | 19.05 | 22.22 |
| AT1G05370.1 | Thale cress | cytosol | 20.75 | 14.63 |
| AT3G22410.1 | Thale cress | cytosol | 18.71 | 13.75 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | EntrezGene:829816 | UniProt:A0A178V650 | ProteinID:AEE86680.1 | ProteinID:ANM67393.1 |
| ArrayExpress:AT4G36640 | EnsemblPlantsGene:AT4G36640 | RefSeq:AT4G36640 | TAIR:AT4G36640 | RefSeq:AT4G36640-TAIR-G | EnsemblPlants:AT4G36640.3 |
| EMBL:BT024856 | ProteinID:CAB16829.1 | ProteinID:CAB80330.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | RefSeq:NP_001329225.1 | RefSeq:NP_195382.1 | UniProt:O23217 |
| ProteinID:OAP00482.1 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR10174 |
| PANTHER:PTHR10174:SF206 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00000A3FD1 |
Description
At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
Coordinates
chr4:-:17276882..17279373
Molecular Weight (calculated)
34047.4 Da
IEP (calculated)
8.794
GRAVY (calculated)
-0.698
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.