Factsheet for Zm00001d033836_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

nucleus: 27061906

gfp PMID: 27061906 doi

X Wang, X Shan, C Xue, Y Wu, S Su, S Li, H Liu, Y Jiang, Y Zhang, Y Yuan

College of Plant Science, Jilin University, Changchun, 130062, China., College of Plant Science, Jilin University, Changchun, 130062, China. yuanyp@jlu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37681	Sorghum	cytosol	91.19	87.06
TraesCS4D01G055200.1	Wheat	cytosol	72.2	72.95
TraesCS4B01G055000.1	Wheat	cytosol	71.86	72.6
TraesCS4A01G259700.1	Wheat	cytosol	71.53	72.26
Os03t0724100-01	Rice	cytosol	72.54	71.57
HORVU4Hr1G009210.2	Barley	cytosol	70.17	70.89
HORVU4Hr1G074380.1	Barley	cytosol	33.22	70.5
TraesCS4B01G055100.1	Wheat	cytosol	66.44	69.26
TraesCS4A01G259600.1	Wheat	cytosol	68.14	68.84
TraesCS4D01G055400.1	Wheat	cytosol	67.8	68.49
HORVU4Hr1G009190.1	Barley	cytosol	67.8	68.49
TraesCS4D01G055300.1	Wheat	cytosol	67.46	68.15
TraesCS4A01G259500.1	Wheat	cytosol	66.78	67.47
HORVU4Hr1G009310.1	Barley	cytosol	66.78	67.47
TraesCS4B01G055200.1	Wheat	cytosol	65.76	66.44
TraesCS4D01G055100.1	Wheat	cytosol	46.78	66.03
HORVU5Hr1G114590.3	Barley	mitochondrion	26.78	64.75
TraesCS7B01G089700.1	Wheat	cytosol	61.69	64.31
HORVU4Hr1G005090.2	Barley	cytosol	28.14	63.85
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	29.83	63.31
Zm00001d033837_P001	Maize	plastid	63.73	63.09
GSMUA_Achr4P03190_001	Banana	cytosol	55.93	58.93
GSMUA_AchrUn_...	Banana	cytosol	55.93	57.89
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	30.51	57.69
HORVU5Hr1G020290.3	Barley	plastid	29.49	56.86
PGSC0003DMT400038571	Potato	cytosol	50.17	55.22
Solyc02g085300.2.1	Tomato	cytosol	40.34	55.09
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	53.9	54.83
KRH15219	Soybean	cytosol	52.2	53.85
KRH51858	Soybean	nucleus, plastid	36.95	53.69
CDY24776	Canola	cytosol	52.88	53.24
Bra010566.1-P	Field mustard	cytosol	52.88	53.24
Bra011696.1-P	Field mustard	nucleus	52.2	53.1
AT4G36640.3	Thale cress	cytosol	52.54	52.72
CDY35466	Canola	cytosol	52.2	52.56
KRH05807	Soybean	cytosol	52.2	52.56
GSMUA_Achr8P26360_001	Banana	cytosol	52.88	52.53
KRH61179	Soybean	cytosol	32.2	52.49
CDY65854	Canola	nucleus	51.19	52.25
AT1G75170.1	Thale cress	cytosol	51.86	51.69
CDX73146	Canola	cytosol	50.51	51.56
Solyc12g089130.1.1	Tomato	cytosol	40.68	51.5
KRH69927	Soybean	cytosol	51.53	51.35
CDX72592	Canola	cytosol	50.17	51.21
CDY42697	Canola	cytosol	49.83	50.87
KRH08288	Soybean	cytosol	50.85	50.68
PGSC0003DMT400013200	Potato	cytosol	49.15	50.52
Bra017768.1-P	Field mustard	cytosol	49.49	50.52
Solyc04g080290.2.1	Tomato	cytosol	48.14	49.48
CDX75583	Canola	cytosol	26.1	49.04
VIT_18s0001g12420.t01	Wine grape	cytosol	52.2	48.89
Bra015863.1-P	Field mustard	cytosol	50.85	39.06
CDY45413	Canola	cytosol	50.85	38.96
Zm00001d040360_P001	Maize	cytosol	40.34	37.66
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	31.19	31.4
Zm00001d010499_P001	Maize	plastid	30.51	31.36
Zm00001d052231_P003	Maize	cytosol	36.27	30.57
Zm00001d019055_P001	Maize	cytosol	16.27	30.19
Zm00001d012847_P001	Maize	cytosol	26.44	28.26
Zm00001d042275_P001	Maize	cytosol	23.05	27.09
Zm00001d042274_P001	Maize	cytosol	20.68	24.3
Zm00001d045573_P004	Maize	plastid	8.81	16.15
Zm00001d048066_P001	Maize	cytosol	20.68	13.96
Zm00001d028231_P003	Maize	cytosol	21.36	13.94
Zm00001d009968_P001	Maize	cytosol	12.88	12.18
Zm00001d034765_P001	Maize	cytosol	9.83	10.18
Zm00001d045574_P002	Maize	plastid	16.61	9.53

Protein Annotations

EntrezGene:100274321	Gene3D:3.40.525.10	MapMan:35.2	UniProt:B4G083	EMBL:BT042771	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ProteinID:ONM08743.1
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00017B7C42	EnsemblPlantsGene:Zm00001d033836	EnsemblPlants:Zm00001d033836_P001
EnsemblPlants:Zm00001d033836_T001	:	:	:	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein

Coordinates

chr1:+:275362864..275366267

Molecular Weight (calculated)

34143.6 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.550

Length

295 amino acids

Sequence
(BLAST)

001: MFRRKHASHS NSSDAEQQEA KINELKSALG PLSAHGEKYC SDTCFRRYLE ARNWNVTKSR KMLEESLKWR ATYKPEDIRW PDVSVEAETG KMYKANFRDR
101: EGRTVIIMRP TKENSTSHDG QIRFLVYVLE NAILDQREGQ EKMVWLIDFT GWTMAHATPI KTARECTSIL QNHYPERLAI AFLLNPPKVF EAFYRAVKYF
201: LDPRSIEKLN FVYLKDEESM KVLYKCIDPV VLPVEFGGKN SVVYNHEDYS KLMLQEDIET SSFWEDDAKT VNHAINGTLV PDVASQLSRI AAKAS

Best Arabidopsis Sequence Match ( AT4G36640.3 )
(BLAST)

001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS

Arabidopsis Description

At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.