Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G055200.1 | Wheat | cytosol | 90.91 | 65.07 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 89.95 | 64.38 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 89.95 | 64.38 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 80.86 | 57.88 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 75.12 | 53.77 |
| EER93541 | Sorghum | cytosol | 73.21 | 51.52 |
| Os03t0724100-01 | Rice | cytosol | 73.68 | 51.51 |
| KXG37682 | Sorghum | cytosol | 70.81 | 50.51 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 32.54 | 48.92 |
| Zm00001d033836_P001 | Maize | nucleus | 66.03 | 46.78 |
| Solyc02g085300.2.1 | Tomato | cytosol | 47.85 | 46.3 |
| KXG37681 | Sorghum | cytosol | 66.99 | 45.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.81 | 43.86 |
| Solyc12g089130.1.1 | Tomato | cytosol | 48.8 | 43.78 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 56.94 | 42.5 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 25.84 | 41.54 |
| KRH61179 | Soybean | cytosol | 34.93 | 40.33 |
| PGSC0003DMT400038571 | Potato | cytosol | 51.67 | 40.3 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 25.84 | 38.85 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 53.59 | 38.62 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 54.55 | 38.38 |
| Zm00001d033837_P001 | Maize | plastid | 54.55 | 38.26 |
| KRH15219 | Soybean | cytosol | 51.67 | 37.76 |
| CDX73146 | Canola | cytosol | 52.15 | 37.72 |
| AT1G75170.1 | Thale cress | cytosol | 52.15 | 36.82 |
| KRH05807 | Soybean | cytosol | 50.72 | 36.18 |
| HORVU5Hr1G020290.3 | Barley | plastid | 25.84 | 35.29 |
| Bra011696.1-P | Field mustard | nucleus | 48.8 | 35.17 |
| CDY42697 | Canola | cytosol | 48.33 | 34.95 |
| CDX72592 | Canola | cytosol | 48.33 | 34.95 |
| Bra017768.1-P | Field mustard | cytosol | 48.33 | 34.95 |
| CDY65854 | Canola | nucleus | 48.33 | 34.95 |
| PGSC0003DMT400013200 | Potato | cytosol | 47.85 | 34.84 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 25.84 | 34.62 |
| CDY24776 | Canola | cytosol | 47.85 | 34.13 |
| Bra010566.1-P | Field mustard | cytosol | 47.85 | 34.13 |
| Solyc04g080290.2.1 | Tomato | cytosol | 46.41 | 33.8 |
| CDY35466 | Canola | cytosol | 47.37 | 33.79 |
| KRH69927 | Soybean | cytosol | 47.85 | 33.78 |
| KRH08288 | Soybean | cytosol | 47.85 | 33.78 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 49.76 | 33.02 |
| AT4G36640.3 | Thale cress | cytosol | 45.93 | 32.65 |
| KRH51858 | Soybean | nucleus, plastid | 31.58 | 32.51 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 18.18 | 31.15 |
| Bra015863.1-P | Field mustard | cytosol | 52.15 | 28.39 |
| CDY45413 | Canola | cytosol | 52.15 | 28.31 |
| TraesCS3D01G186000.2 | Wheat | nucleus | 38.28 | 26.4 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 33.01 | 24.73 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 31.1 | 22.97 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 40.67 | 21.63 |
| CDX75583 | Canola | cytosol | 15.79 | 21.02 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 24.88 | 20.39 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 22.49 | 19.58 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 22.01 | 19.01 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 22.49 | 18.88 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 21.53 | 18.37 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 21.05 | 13.92 |
| TraesCS7D01G448500.3 | Wheat | mitochondrion, plastid | 17.7 | 11.94 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 22.49 | 10.47 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G055100.1 | EnsemblPlantsGene:TraesCS4D01G055100 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:IPR001251 |
| InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 | PFscan:PS50191 | SMART:SM00516 |
| SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:30412566..30413965
Molecular Weight (calculated)
24089.7 Da
IEP (calculated)
7.748
GRAVY (calculated)
-0.539
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSRKHASHF NSDDAEQRQA KPDVSVEAEM GKMYRATFTD KEGRTVVIMR PAKQNTSSHE GQLRHLIYTM ENAVLSLPQG LDKMVWLVDY TGWTLANATP
101: IKTARDSTNI LQNHYPERLS VAFLFNPPKV FESFFKVIKV FLDSKSIQKV NFVYKDNEES LKTMYKHIDP EILPAEFGGK NNVVYNQEEY TKLMTKDDMK
201: TASFWAADC
101: IKTARDSTNI LQNHYPERLS VAFLFNPPKV FESFFKVIKV FLDSKSIQKV NFVYKDNEES LKTMYKHIDP EILPAEFGGK NNVVYNQEEY TKLMTKDDMK
201: TASFWAADC
001: MVSGEGETGK VYKAGFHDRH GRTVLILRPG LQNTKSLENQ MKHLVYLIEN AILNLPEDQE QMSWLIDFTG WSMSTSVPIK SARETINILQ NHYPERLAVA
101: FLYNPPRLFE AFWKIVKYFI DAKTFVKVKF VYPKNSESVE LMSTFFDEEN LPTEFGGKAL LQYNYEEFSK QMNQDDVKTA NFWGLGHSNN NQLHASNGFS
201: GAEIAPEPIQ NHP
101: FLYNPPRLFE AFWKIVKYFI DAKTFVKVKF VYPKNSESVE LMSTFFDEEN LPTEFGGKAL LQYNYEEFSK QMNQDDVKTA NFWGLGHSNN NQLHASNGFS
201: GAEIAPEPIQ NHP
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.