Factsheet for Zm00001d045573_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19106	Sorghum	plastid	89.44	56.25
Os02t0321500-01	Rice	mitochondrion	75.78	46.74
HORVU0Hr1G022240.10	Barley	mitochondrion	75.16	46.18
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	73.29	45.04
GSMUA_Achr3P14480_001	Banana	mitochondrion	63.35	38.93
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	73.91	38.89
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	74.53	38.71
Solyc03g112640.2.1	Tomato	plastid	56.52	34.73
KRH03256	Soybean	endoplasmic reticulum, plastid	55.9	34.35
KRH57102	Soybean	cytosol, plastid	54.66	33.59
PGSC0003DMT400046785	Potato	mitochondrion	54.66	33.59
VIT_17s0000g08850.t01	Wine grape	mitochondrion	53.42	33.08
Bra035864.1-P	Field mustard	plastid	52.17	33.07
CDX87279	Canola	plastid	52.17	33.07
CDY16746	Canola	plastid	52.17	33.07
AT5G63060.1	Thale cress	plastid	51.55	31.56
Zm00001d045574_P002	Maize	plastid	95.03	29.77
Zm00001d042275_P001	Maize	cytosol	17.39	11.16
Zm00001d042274_P001	Maize	cytosol	17.39	11.16
Zm00001d012847_P001	Maize	cytosol	18.63	10.87
Zm00001d019055_P001	Maize	cytosol	10.56	10.69
Zm00001d052231_P003	Maize	cytosol	22.98	10.57
Zm00001d040360_P001	Maize	cytosol	20.5	10.44
Zm00001d033836_P001	Maize	nucleus	16.15	8.81
Zm00001d010499_P001	Maize	plastid	15.53	8.71
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	14.91	8.19
Zm00001d033837_P001	Maize	plastid	14.91	8.05
Zm00001d034765_P001	Maize	cytosol	13.66	7.72
Zm00001d009968_P001	Maize	cytosol	13.66	7.05
Zm00001d048066_P001	Maize	cytosol	16.77	6.18
Zm00001d028231_P003	Maize	cytosol	15.53	5.53

Protein Annotations

EMBL:BT036211	EnsemblPlants:Zm00001d045573_P004	EnsemblPlants:Zm00001d045573_T004	EnsemblPlantsGene:Zm00001d045573	EntrezGene:100193146	Gene3D:3.40.525.10
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197
PFAM:PF00650	PFscan:PS50191	ProteinID:AQL02618.1	ProteinID:AQL02619.1	ProteinID:AQL02622.1	SEG:seg
SUPFAM:SSF52087	UniParc:UPI00017B6946	UniProt:B4FGH3	MapMan:35.2	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein

Coordinates

chr9:+:27025371..27031020

Molecular Weight (calculated)

18313.2 Da

IEP (calculated)

8.922

GRAVY (calculated)

-0.160

Length

161 amino acids

Sequence
(BLAST)

001: MMTSSACYYL CRSLVRAPPL KSRSAVRCPS AAPPGASGAT STSKTQDPVE NQKLCAYLVE KAVNRLPPGA ENILGIFDLR GFRVENGDLQ FLKFLMDVFY
101: YYYPKRLGQV LFVDAPFVFQ PMWQVVKPLL KSYASLVRFC DTETVRKEYF KEETVPPDFR D

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.