Factsheet for HORVU1Hr1G074180.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G111110.1
HORVU6Hr1G077280.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09800.1	HORVU3Hr1G111110.1	AT4G33940.1	21798944
AT5G09800.1	HORVU6Hr1G077280.1	AT4G33945.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G274800.1	Wheat	mitochondrion	96.91	96.91
TraesCS1D01G274600.1	Wheat	mitochondrion	96.47	96.47
TraesCS1B01G284200.1	Wheat	mitochondrion	95.36	95.36
Os05t0439400-01	Rice	plasma membrane	87.42	87.61
KXG22102	Sorghum	mitochondrion	85.43	84.68
Zm00001d038280_P001	Maize	cytosol	83.89	84.07
HORVU2Hr1G123130.1	Barley	cytosol	5.3	52.17
GSMUA_Achr5P01020_001	Banana	cytosol	38.19	43.14
VIT_18s0166g00190.t01	Wine grape	plasma membrane	28.04	31.75
VIT_04s0044g00870.t01	Wine grape	cytosol	28.48	31.31
KRH70331	Soybean	mitochondrion	27.37	30.47
KRH08734	Soybean	mitochondrion	27.81	30.43
HORVU2Hr1G074130.1	Barley	plastid	34.44	30.12
PGSC0003DMT400002079	Potato	cytosol	27.15	29.43
Solyc04g071030.1.1	Tomato	cytosol	27.37	29.04
KRH53869	Soybean	cytosol	26.27	28.54
Solyc11g005700.1.1	Tomato	cytosol	26.27	28.33
PGSC0003DMT400065698	Potato	cytosol	26.05	28.1
CDX92262	Canola	cytosol	25.17	27.6
KRH59546	Soybean	cytosol	25.39	27.51
KRH43397	Soybean	cytosol	25.17	27.27
CDX84538	Canola	cytosol	25.17	27.21
Bra037568.1-P	Field mustard	cytosol	24.72	27.12
CDX82332	Canola	cytosol	25.17	26.89
CDX75980	Canola	cytosol	25.17	26.89
Bra001717.1-P	Field mustard	cytosol	25.17	26.89
CDY71041	Canola	cytosol	24.5	26.88
AT3G18710.1	Thale cress	cytosol	24.5	26.75
CDY08864	Canola	cytosol	24.72	26.73
Bra024318.1-P	Field mustard	cytosol	24.72	26.73
Bra022347.1-P	Field mustard	cytosol	24.94	26.65
KRH36899	Soybean	cytosol	21.63	26.42
CDX99325	Canola	cytosol	24.5	26.24
AT5G64660.1	Thale cress	cytosol	23.84	25.71
AT5G09800.1	Thale cress	cytosol	23.18	25.67
HORVU3Hr1G083500.1	Barley	cytosol	22.52	24.7
HORVU4Hr1G064070.1	Barley	mitochondrion	23.62	24.32
HORVU7Hr1G093780.1	Barley	cytosol, endoplasmic reticulum, extracellular	20.75	24.04
HORVU6Hr1G066870.1	Barley	cytosol	22.74	24.01
HORVU6Hr1G034250.1	Barley	cytosol, nucleus, peroxisome	22.3	23.33
HORVU2Hr1G076490.1	Barley	mitochondrion	4.42	22.99
HORVU7Hr1G040790.2	Barley	plastid	22.74	21.11
HORVU6Hr1G077120.1	Barley	plastid	23.62	20.9
HORVU6Hr1G089560.1	Barley	plastid	20.31	20.4
HORVU6Hr1G089590.1	Barley	plastid	20.31	20.35
HORVU4Hr1G066070.1	Barley	cytosol	20.31	20.0
HORVU0Hr1G003810.1	Barley	cytosol	18.76	19.72
HORVU2Hr1G123050.1	Barley	cytosol	14.13	19.05

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EMBL:AK361083	UniProt:F2DB19	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G074180	EnsemblPlants:HORVU1Hr1G074180.1	InterPro:IPR003613	InterPro:IPR013083
PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF21	SMART:SM00504	SUPFAM:SSF57850
UniParc:UPI00020062EF	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DB19]

Coordinates

chrchr1H:+:507187193..507189384

Molecular Weight (calculated)

46660.0 Da

IEP (calculated)

8.882

GRAVY (calculated)

0.279

Length

453 amino acids

Sequence
(BLAST)

001: MDAVVAGQQA RRRIRPPEPL VMAASPTTPA AFRCPISLEV MRSPVSLPTG ATYDRASIQR WLDSGHRTCP ATRLPLASTD LVPNLLLRRL IHLHAATLPP
101: SPSPEEALSQ LAASHGEPAA AEKAVRSLAA KIAPEKGKQA SVASAVAADL DSTVPALLSF AKGGAGTDAR VDAVRILATV APEIASYLTV DGTEKRGRVK
201: MAVEALAAVL SAGGVSEDAK KAVITVLVAS DLGRIVTTLL AAGPTGVVVL ESILTSPVPD ADVKTAIADR SELFPDLVRI LKEAASPAAI LCMAAAVQVR
301: GRPARASMVR AGAVPALALA VAAAPTAAAE SALILLVEAA RCSDGKAAIA EDAAEVAAAV MGRMIRVGQM GREAAVALLW LSCCAGGGER KMREALAAAP
401: EAVGKLLVVM QGDCSPATSR MAGELLRAVR MEQERKGMVS SSYDSRTIHV MPY

Best Arabidopsis Sequence Match ( AT5G64660.1 )
(BLAST)

001: MRKDDLCITV PTFFRCPISL DVMKSPVSLC TGVTYDRASI QRWLDGGNNT CPATMQILQN KDFIPNRTLQ RLIEIWSDSV RRRTCVESAE LAAPTRDEIA
101: DAIDRVKIEK EERDDREVLS KIVRFGRESD DNRGFLAGKD DFVKLLVDLI NQVDFETTSA AKSLVVQEAV KILSTIRSKV SDRRRFSNLI LTNGRDRLSV
201: IVYLFKTGNV ELKIDCAGLL EFIAVDAESK LLIAERDGLI TELMKSISKD SDLSLIESSL SCLIAISSPK RVKLNLLREK LIGDVTKLLS DSTSSLSVSV
301: TEKCLKLLEI LASTKEGRSE ICGGDGECLK TVVKKLMKVS TAATEHAVTV LWSVSYLFKE DKALEAVTSV NGVTKILLLL QSNCSPAVRR MLTDLLKVFK
401: VNSRSCLSAY DTKTTHIMPF

Arabidopsis Description

PUB27U-box domain-containing protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.