CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
extracellular 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70331	Soybean	mitochondrion	87.2	88.7
VIT_18s0166g00190.t01	Wine grape	plasma membrane	42.75	44.25
PGSC0003DMT400002079	Potato	cytosol	43.96	43.54
GSMUA_Achr8P30420_001	Banana	mitochondrion	28.02	42.49
Solyc04g071030.1.1	Tomato	cytosol	43.24	41.92
KRH53869	Soybean	cytosol	39.37	39.09
KRH43397	Soybean	cytosol	39.37	39.0
KRH59546	Soybean	cytosol	38.41	38.04
GSMUA_Achr6P18140_001	Banana	cytosol	34.06	34.47
Zm00001d016719_P001	Maize	cytosol	35.51	34.27
GSMUA_Achr10P...	Banana	plastid	31.4	33.85
GSMUA_Achr5P01020_001	Banana	cytosol	32.37	33.42
Zm00001d050689_P001	Maize	cytosol	34.54	33.33
KRH36899	Soybean	cytosol	29.47	32.88
Os04t0418500-01	Rice	plastid	35.75	32.82
Zm00001d025379_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	34.78	32.43
EES05205	Sorghum	cytosol	35.27	32.23
OQU81548	Sorghum	mitochondrion	34.78	32.21
TraesCS2D01G296700.1	Wheat	cytosol, mitochondrion, plastid	33.82	31.75
TraesCS2B01G315100.1	Wheat	cytosol	33.57	31.52
TraesCS2A01G298600.1	Wheat	cytosol, mitochondrion, plastid	33.57	31.52
Os02t0540700-00	Rice	plastid	34.54	28.32
Os05t0439400-01	Rice	plasma membrane	30.68	28.1
Zm00001d038280_P001	Maize	cytosol	30.43	27.88
HORVU1Hr1G074180.1	Barley	mitochondrion, plastid	30.43	27.81
TraesCS1A01G274800.1	Wheat	mitochondrion	30.19	27.59
KXG22102	Sorghum	mitochondrion	30.43	27.57
HORVU2Hr1G074130.1	Barley	plastid	34.3	27.41
TraesCS1D01G274600.1	Wheat	mitochondrion	29.95	27.37
TraesCS1B01G284200.1	Wheat	mitochondrion	29.95	27.37
KRH55660	Soybean	cytosol	7.97	26.4
KRH68013	Soybean	cytosol	18.6	26.01
KRH72180	Soybean	cytosol	14.49	25.86
KRH26691	Soybean	cytosol	22.95	24.55
KRH72176	Soybean	cytosol	24.64	24.4
KRH22633	Soybean	cytosol, nucleus	23.67	24.32
KRH35744	Soybean	cytosol	24.15	23.87
KRG96257	Soybean	cytosol	24.15	23.87
KRH68014	Soybean	cytosol	24.15	23.81
KRG96268	Soybean	cytosol	23.91	23.63
KRH77156	Soybean	cytosol	25.6	23.61
KRH32856	Soybean	cytosol	23.91	23.57
KRH50316	Soybean	cytosol, plasma membrane, plastid	22.71	22.71
KRH58142	Soybean	cytosol	24.15	22.52
KRH61438	Soybean	cytosol	22.71	22.27
KRH48691	Soybean	cytosol	23.43	22.2
KRH70657	Soybean	cytosol	22.22	22.17
KRH39018	Soybean	mitochondrion	23.43	22.15
KRH05554	Soybean	cytosol	22.22	21.96
KRH52124	Soybean	cytosol	22.22	21.65
KRH72959	Soybean	cytosol, mitochondrion	22.46	21.23
KRH17309	Soybean	cytosol, mitochondrion	22.46	21.18
KRG88755	Soybean	cytosol	21.98	21.16
KRH59579	Soybean	cytosol	19.08	21.12
KRH22634	Soybean	cytosol	21.5	21.09
KRH25324	Soybean	cytosol	18.36	20.94
KRH28330	Soybean	plastid	25.85	20.82
KRH40934	Soybean	cytosol	19.32	20.62
KRH26690	Soybean	cytosol	20.77	20.14
KRH30918	Soybean	mitochondrion	20.77	19.77
KRH64033	Soybean	cytosol	18.6	19.59
KRG88869	Soybean	cytosol	19.57	19.42
KRH25323	Soybean	cytosol	18.84	19.31
KRH53906	Soybean	cytosol	18.36	19.29
KRG97963	Soybean	mitochondrion	19.81	19.03

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100786235	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	EMBL:ACUP02010201	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_16G170300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	UniProt:I1MPA0	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRH08734
ProteinID:KRH08734	ProteinID:KRH08734.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF106
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000233E372	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:33053329..33054573

Molecular Weight (calculated)

44687.5 Da

IEP (calculated)

8.306

GRAVY (calculated)

0.177

Length

414 amino acids

Sequence
(BLAST)

001: MAKVRDQKLY VTVPSLFRCP ISMDVMRSPV SLCTGVTYDR ASIQHWLDSG HDTCPATMQV LPSKDFIPNL TLHRLIRLWL LSSSSSSSAE PPSPSSSADH
101: LRPLLRQIQT SDDNVPGILS KIAEFAKKSG ENRRSLAAFP GFDSAVVRAL AGSNSLIDVA ENAIYLLGSV FRENGKSTGE RIRKLILDAR EQCFDAMIFV
201: LRNGSLKSKI ETVKVLEFLA CDFQSSKSIS EACGLLSLLA SFLKDGGEEI NDAVLSLLGV VSVTHSAKVE LVSSGVVEVV TKLLRACSAA TAERCLRMLA
301: VLATCAEGRA AMAEEPSCAA AVVERITKAS KAAAADAVAV LWSLCCLCRN VKVRDEVAKR NGVVVVLLVM QRGWEEHVRS MCVDLIKVLK GACKNGLGLE
401: LGCYDTKTTH IKPC

Best Arabidopsis Sequence Match ( AT5G09800.1 )
(BLAST)

001: MRSDDLYITT VPCFFKCPIS LDVMKSPVSL STGVTYDRVS IQRWLDDGNN TCPATMQILQ NKEFVPNLTL HRLIDHWSDS INRRADSESP ESDTPTRDEI
101: NAAIERFRIE NDARSKILRF ARESDENREF LAGKDDFVAM LVDLISDSRN FSDSQLLLVG EAVKILSMIR RKIFDRRRLS NLILTNGGDC LTSFFLLIKR
201: GNPKLKIDCS AVLEFIAVDA ESKLIIAKGE GLVTEIIKLI SSDSDSSLIE ANLSLLIAIA SSKRVKLALI REKLVTKLTS LLTDPTTSVS VTEKCLKLLE
301: AISSCKEGRS EICDGVCVET VVNKLMKVST AATEHAVTVL WSVCYLFKEK KAQDAVIRIN GVTKILLLLQ SNCSLTVRHM LTDLLKVFKV NSRSCLSVYE
401: TKTTHIMPF

Arabidopsis Description

PUB28U-box domain-containing protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.