CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25323	Soybean	cytosol	88.97	91.83
KRH22634	Soybean	cytosol	69.78	68.96
KRH26690	Soybean	cytosol	70.02	68.38
VIT_06s0009g00370.t01	Wine grape	cytosol	58.27	60.0
PGSC0003DMT400038196	Potato	cytosol	51.8	51.67
KRH72180	Soybean	cytosol	28.3	50.86
Solyc01g009320.1.1	Tomato	cytosol	50.6	50.48
Solyc11g068940.1.1	Tomato	cytosol	50.6	49.88
Solyc06g074140.1.1	Tomato	cytosol	49.64	49.29
GSMUA_Achr11P...	Banana	cytosol	42.45	48.36
PGSC0003DMT400015179	Potato	cytosol	46.04	47.64
KRH68013	Soybean	cytosol	32.37	45.61
KRH22633	Soybean	cytosol, nucleus	42.45	43.92
KRG96257	Soybean	cytosol	42.69	42.48
KRH26691	Soybean	cytosol	39.33	42.38
KRG96268	Soybean	cytosol	42.45	42.24
KRH68014	Soybean	cytosol	42.45	42.14
KRH35744	Soybean	cytosol	41.97	41.77
KRH25324	Soybean	cytosol	35.49	40.77
KRH32856	Soybean	cytosol	41.01	40.71
KRH72176	Soybean	cytosol	40.29	40.19
KRH50316	Soybean	cytosol, plasma membrane, plastid	27.34	27.54
KRH30918	Soybean	mitochondrion	28.54	27.36
KRG97963	Soybean	mitochondrion	28.06	27.15
KRH70657	Soybean	cytosol	26.86	26.99
KRH48691	Soybean	cytosol	28.06	26.77
KRH39018	Soybean	mitochondrion	28.06	26.71
KRH17309	Soybean	cytosol, mitochondrion	25.66	24.37
KRH72959	Soybean	cytosol, mitochondrion	25.42	24.2
KRH64033	Soybean	cytosol	22.06	23.41
KRH53906	Soybean	cytosol	22.06	23.35
KRH53869	Soybean	cytosol	23.26	23.26
KRH58142	Soybean	cytosol	24.46	22.97
KRH61438	Soybean	cytosol	23.02	22.75
KRH77156	Soybean	cytosol	24.46	22.72
KRH05554	Soybean	cytosol	22.78	22.67
KRH52124	Soybean	cytosol	23.02	22.59
KRH40934	Soybean	cytosol	20.86	22.42
KRH55660	Soybean	cytosol	6.71	22.4
KRH36899	Soybean	cytosol	19.9	22.37
KRH43397	Soybean	cytosol	22.3	22.25
KRH59579	Soybean	cytosol	19.9	22.19
KRH59546	Soybean	cytosol	22.06	22.01
KRG88755	Soybean	cytosol	22.3	21.63
KRH28330	Soybean	plastid	24.7	20.04
KRH08734	Soybean	mitochondrion	19.42	19.57
KRH70331	Soybean	mitochondrion	18.7	19.16

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100811293	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_U009600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
UniProt:I1LKL9	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRG88869	ProteinID:KRG88869
ProteinID:KRG88869.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF104	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000233CCEC	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chrscaffold_21:+:75013..76652

Molecular Weight (calculated)

46787.5 Da

IEP (calculated)

8.942

GRAVY (calculated)

-0.005

Length

417 amino acids

Sequence
(BLAST)

001: MAEVEIPQYF VCPISFQIME DPVTTVTGIT YDRESIEKWL LKAKDCVCPV SKQPLPRSSQ YLTPNHTLRR LIQAWCSANT SNGVDRIPTP KTPLSMVQVQ
101: KLLKGLEVPC SYQKSLEKLH GLATTERNRI CMAEAGVAKA MIKLINKSFK EGNTNLNNTT CIEKVLRIVH VLWSNDQSSM KSTLVGENNL DFINSLTWIL
201: KVHLDDNNIK MVNEAMPLLK LTIEVAADST LLGSLGLEFF KEIVRVLRKR ALLSQQAIKS ALCVLTETST SGRNRTRIVE AGAVTELIEL ELEKPEKNMT
301: ELIFNLLALL CSCADGREQF LRHAAAIAVV SKRVLRVSAA TDDRAIHVFS VIAKFSASNE VVLEMLRVGA VSKLCMLMQA DCASYLKEKA RDILRLHSKV
401: WNNSPCIQLY LFTRHQR

Best Arabidopsis Sequence Match ( AT3G11840.1 )
(BLAST)

001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI

Arabidopsis Description

PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.