Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88869 | Soybean | cytosol | 91.83 | 88.97 |
| KRH22634 | Soybean | cytosol | 71.29 | 68.25 |
| KRH26690 | Soybean | cytosol | 71.04 | 67.21 |
| VIT_06s0009g00370.t01 | Wine grape | cytosol | 57.92 | 57.78 |
| PGSC0003DMT400038196 | Potato | cytosol | 52.48 | 50.72 |
| KRH72180 | Soybean | cytosol | 28.47 | 49.57 |
| Solyc11g068940.1.1 | Tomato | cytosol | 51.49 | 49.17 |
| Solyc01g009320.1.1 | Tomato | cytosol | 50.49 | 48.8 |
| Solyc06g074140.1.1 | Tomato | cytosol | 50.0 | 48.1 |
| GSMUA_Achr11P... | Banana | cytosol | 43.56 | 48.09 |
| PGSC0003DMT400015179 | Potato | cytosol | 46.04 | 46.15 |
| KRH68013 | Soybean | cytosol | 32.18 | 43.92 |
| KRH22633 | Soybean | cytosol, nucleus | 42.57 | 42.68 |
| KRG96257 | Soybean | cytosol | 43.56 | 42.0 |
| KRH68014 | Soybean | cytosol | 43.56 | 41.9 |
| KRG96268 | Soybean | cytosol | 43.32 | 41.77 |
| KRH35744 | Soybean | cytosol | 42.82 | 41.29 |
| KRH26691 | Soybean | cytosol | 39.36 | 41.09 |
| KRH32856 | Soybean | cytosol | 41.83 | 40.24 |
| KRH25324 | Soybean | cytosol | 35.64 | 39.67 |
| KRH72176 | Soybean | cytosol | 40.84 | 39.47 |
| KRH50316 | Soybean | cytosol, plasma membrane, plastid | 27.48 | 26.81 |
| KRH70657 | Soybean | cytosol | 26.98 | 26.27 |
| KRH39018 | Soybean | mitochondrion | 28.22 | 26.03 |
| KRH48691 | Soybean | cytosol | 27.72 | 25.63 |
| KRH30918 | Soybean | mitochondrion | 27.48 | 25.52 |
| KRG97963 | Soybean | mitochondrion | 26.73 | 25.06 |
| KRH64033 | Soybean | cytosol | 23.27 | 23.92 |
| KRH53906 | Soybean | cytosol | 23.02 | 23.6 |
| KRH17309 | Soybean | cytosol, mitochondrion | 25.25 | 23.23 |
| KRH72959 | Soybean | cytosol, mitochondrion | 25.0 | 23.06 |
| KRH40934 | Soybean | cytosol | 22.03 | 22.94 |
| KRH61438 | Soybean | cytosol | 23.27 | 22.27 |
| KRH59579 | Soybean | cytosol | 20.54 | 22.19 |
| KRH52124 | Soybean | cytosol | 23.02 | 21.88 |
| KRH58142 | Soybean | cytosol | 24.01 | 21.85 |
| KRH77156 | Soybean | cytosol | 24.01 | 21.6 |
| KRH55660 | Soybean | cytosol | 6.68 | 21.6 |
| KRH05554 | Soybean | cytosol | 22.28 | 21.48 |
| KRH53869 | Soybean | cytosol | 22.03 | 21.34 |
| KRH43397 | Soybean | cytosol | 21.29 | 20.57 |
| KRH36899 | Soybean | cytosol | 18.81 | 20.49 |
| KRG88755 | Soybean | cytosol | 21.78 | 20.47 |
| KRH59546 | Soybean | cytosol | 21.04 | 20.33 |
| KRH28330 | Soybean | plastid | 24.01 | 18.87 |
| KRH08734 | Soybean | mitochondrion | 19.31 | 18.84 |
| KRH70331 | Soybean | mitochondrion | 18.56 | 18.43 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100787426 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02007236 | InterPro:ARM-like |
| InterPro:ARM-type_fold | EnsemblPlantsGene:GLYMA_12G095000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | UniProt:I1LRL5 | InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | EnsemblPlants:KRH25323 |
| ProteinID:KRH25323 | ProteinID:KRH25323.1 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF104 |
| SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI000233C5D9 | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:7915772..7916986
Molecular Weight (calculated)
45659.0 Da
IEP (calculated)
8.418
GRAVY (calculated)
-0.006
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVEIPQYF VCPISFQIME DPVTTVTGIT YDRESIEQWL LKAKDCVCPV SKQPLPRSSQ YLTPNHTLRR LIQAWCSANT ANGVDRIPTP KTPLSMIQVQ
101: KLVKGLEAPC SYQTSLEKLH ALATIERNRT CMAEASVAKA MIKLINKSFK EGNTNTTCIE KALRIVHVLW SNDQYSMKTL VGEDLDFINS LTWIVRLHLD
201: ENNIKMVNEA MPLLKLTIEV VDSTLLGNLS LEFFKEMVRV LRKKRLSQQA IKYALWVLTE TSTLGRNRTR IVEAGAVTEL IELELEKPEK NMTELIFNLL
301: ALLCSCADGR EQFLRHAAGI AVLSKRVFRV SAATDDRAIH VFSVIAKFSA SNEVVLEMLR VGAVSKLCMV MQADCASYLK EKARDILRLH SKVWNNSPCI
401: QNVL
101: KLVKGLEAPC SYQTSLEKLH ALATIERNRT CMAEASVAKA MIKLINKSFK EGNTNTTCIE KALRIVHVLW SNDQYSMKTL VGEDLDFINS LTWIVRLHLD
201: ENNIKMVNEA MPLLKLTIEV VDSTLLGNLS LEFFKEMVRV LRKKRLSQQA IKYALWVLTE TSTLGRNRTR IVEAGAVTEL IELELEKPEK NMTELIFNLL
301: ALLCSCADGR EQFLRHAAGI AVLSKRVFRV SAATDDRAIH VFSVIAKFSA SNEVVLEMLR VGAVSKLCMV MQADCASYLK EKARDILRLH SKVWNNSPCI
401: QNVL
001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
Arabidopsis Description
PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.