CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55660	Soybean	cytosol	22.97	81.6
KRH77156	Soybean	cytosol	82.43	81.51
VIT_00s0471g00010.t01	Wine grape	cytosol	75.9	75.39
AT3G49810.1	Thale cress	cytosol	71.4	70.76
KRH28330	Soybean	plastid	81.76	70.62
Bra029975.1-P	Field mustard	cytosol	69.37	69.53
CDX83098	Canola	cytosol	69.37	69.53
CDY53333	Canola	cytosol	69.37	68.9
AT5G65920.1	Thale cress	cytosol	67.57	67.57
CDY69247	Canola	cytosol	65.77	65.91
Bra037833.1-P	Field mustard	cytosol	65.09	65.24
CDY18670	Canola	cytosol	65.09	65.24
Zm00001d019807_P001	Maize	extracellular	13.51	63.83
KRH05554	Soybean	cytosol	59.01	62.53
KRH52124	Soybean	cytosol	59.68	62.35
KRG88755	Soybean	cytosol	59.68	61.63
KRH61438	Soybean	cytosol	58.56	61.61
EER95229	Sorghum	cytosol	60.14	58.17
HORVU4Hr1G066070.1	Barley	cytosol	59.91	57.83
Os03t0232600-01	Rice	cytosol	59.68	57.73
Zm00001d028294_P001	Maize	cytosol	59.46	57.52
Zm00001d048008_P001	Maize	cytosol	59.91	57.45
TraesCS4B01G236200.1	Wheat	cytosol	59.23	57.3
TraesCS4D01G237600.1	Wheat	cytosol	59.01	57.08
TraesCS4A01G060800.1	Wheat	cytosol	58.78	56.86
Zm00001d000044_P001	Maize	cytosol	22.75	43.72
KRH22633	Soybean	cytosol, nucleus	25.0	27.54
KRH26691	Soybean	cytosol	23.42	26.87
KRH50316	Soybean	cytosol, plasma membrane, plastid	24.77	26.57
KRH72176	Soybean	cytosol	25.0	26.55
KRH72180	Soybean	cytosol	13.74	26.29
KRH32856	Soybean	cytosol	24.77	26.19
KRH70657	Soybean	cytosol	24.32	26.02
KRH68013	Soybean	cytosol	16.89	25.34
KRH53869	Soybean	cytosol	23.65	25.18
KRH43397	Soybean	cytosol	23.65	25.12
KRH59546	Soybean	cytosol	23.65	25.12
KRH36899	Soybean	cytosol	20.95	25.07
KRH48691	Soybean	cytosol	24.32	24.71
KRH39018	Soybean	mitochondrion	24.32	24.66
KRH68014	Soybean	cytosol	23.2	24.52
KRH25324	Soybean	cytosol	20.05	24.52
KRG88869	Soybean	cytosol	22.97	24.46
KRH64033	Soybean	cytosol	21.4	24.17
KRH08734	Soybean	mitochondrion	22.52	24.15
KRH53906	Soybean	cytosol	21.4	24.11
KRH25323	Soybean	cytosol	21.85	24.01
KRH17309	Soybean	cytosol, mitochondrion	23.65	23.92
KRH35744	Soybean	cytosol	22.52	23.87
KRH70331	Soybean	mitochondrion	21.85	23.83
KRH72959	Soybean	cytosol, mitochondrion	23.42	23.74
KRH22634	Soybean	cytosol	22.52	23.7
KRG97963	Soybean	mitochondrion	22.97	23.67
KRG96257	Soybean	cytosol	22.3	23.63
KRH26690	Soybean	cytosol	22.52	23.42
KRG96268	Soybean	cytosol	22.07	23.39
KRH59579	Soybean	cytosol	19.59	23.26
KRH40934	Soybean	cytosol	20.05	22.94
KRH30918	Soybean	mitochondrion	22.07	22.53

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100781741	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02003205	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_05G107300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:K7KPI2	EnsemblPlants:KRH58142
ProteinID:KRH58142	ProteinID:KRH58142.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF105
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000233A3F7	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:28534573..28536800

Molecular Weight (calculated)

48380.8 Da

IEP (calculated)

6.496

GRAVY (calculated)

0.307

Length

444 amino acids

Sequence
(BLAST)

001: MPMFEPHCKR GGVEGQILDL DTAVKDGVLG GGVDTGVVGT GVGEKLDLGK MIEELDLCEV PSVFICPISL EPMQDPVTLC TGQTYERCNI LKWFSLGHFT
101: CPTTMQELWD GSLTPNTTLH RLISTWFSQK YLVMKKRSED VLGRVLEIVE TLKKVKGQAR VSALKELHQV VAAHATARKA LVDGGGVSVV SSLLSPFTSH
201: TVGAEVIGVL VSLSLDCESK RSLVQPAKVS LMVDILNEGS IETKINCTWL IETLIEEKDF QMVIFRSHSL LVGLMRLVKD KRHTNGICSG LRLLRTLCLH
301: SEVKSLLVSI GAVSQLVQLL PGLEHECLEL ALSILDALAS VPEGILALKD CSNTIPVMVK LLMRVSENCT QYALSILWSV CNVAPDECSL IAVEAGLAAK
401: LLLVIQSGCN PILKQQSTEL LKLCSLNYSD TIFISKCKLT RTIQ

Best Arabidopsis Sequence Match ( AT3G49810.1 )
(BLAST)

001: MPMFQPLKRD GLIGFEGGGD GQVLDLDTAV KDGVLGGVNG GGVGVVDEKL DLKKMIKELD LQDIPSVFIC PISLEPMQDP VTLCTGQTYE RLNIHKWFNL
101: GHLTCPTTMQ ELWDDTVTPN KTLHHLIYTW FSQKYVLMKK RSEDVQGRAI EILGTLKKAK GQARVHALSE LKQIVIAHLM ARKTVVEEGG VSVISSLLGP
201: FTSHAVGSEV VAILVSLDLD SDSKSGLMQP AKVSLIVDML NDGSNETKIN CARLIRGLVE EKGFRAELVS SHSLLVGLMR LVKDKRHRNG VSPALRLLKP
301: ISVHKQVRSL MVSIGAVPQL VDILPSLDPE CLELALFVLD ALCTDVEGRV AVKDSANTIP YTVRVLMRVS ENCTNYALSI LWSVCKLAPE ECSPLAVEVG
401: LAAKLLLVIQ SGCDAALKQR SAELLKLCSL HYSDTMFISK CKLTRTIQ

Arabidopsis Description

PUB30U-box domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q058P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.