Factsheet for Zm00001d000044_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019807_P001	Maize	extracellular	22.51	55.32
KRH55660	Soybean	cytosol	25.54	47.2
Zm00001d048008_P001	Maize	cytosol	64.94	32.4
EER95229	Sorghum	cytosol	64.07	32.24
Zm00001d028294_P001	Maize	cytosol	63.64	32.03
TraesCS4B01G236200.1	Wheat	cytosol	61.9	31.15
HORVU4Hr1G066070.1	Barley	cytosol	61.9	31.09
TraesCS4D01G237600.1	Wheat	cytosol	61.47	30.94
TraesCS4A01G060800.1	Wheat	cytosol	61.04	30.72
Os03t0232600-01	Rice	cytosol	61.04	30.72
Solyc04g077610.2.1	Tomato	cytosol	45.45	25.06
GSMUA_Achr8P04940_001	Banana	cytosol	46.32	24.77
CDX83098	Canola	cytosol	45.89	23.93
GSMUA_Achr3P25750_001	Banana	cytosol	44.16	23.78
Bra029975.1-P	Field mustard	cytosol	45.45	23.7
GSMUA_Achr2P08620_001	Banana	cytosol	44.16	23.5
CDY53333	Canola	cytosol	45.45	23.49
KRH77156	Soybean	cytosol	45.45	23.39
VIT_00s0471g00010.t01	Wine grape	cytosol	45.02	23.27
AT3G49810.1	Thale cress	cytosol	45.02	23.21
VIT_18s0001g08790.t01	Wine grape	cytosol	44.59	22.79
KRH58142	Soybean	cytosol	43.72	22.75
PGSC0003DMT400012566	Potato	cytosol	44.16	22.72
GSMUA_Achr4P07400_001	Banana	cytosol	41.13	21.89
CDY69247	Canola	cytosol	41.56	21.67
Bra037833.1-P	Field mustard	cytosol	41.13	21.44
CDY18670	Canola	cytosol	41.13	21.44
AT5G65920.1	Thale cress	cytosol	40.26	20.95
KRH61438	Soybean	cytosol	37.66	20.62
KRG88755	Soybean	cytosol	38.1	20.47
KRH05554	Soybean	cytosol	36.8	20.29
KRH52124	Soybean	cytosol	37.23	20.24
KRH28330	Soybean	plastid	45.02	20.23
Zm00001d001769_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	22.08	13.01
Zm00001d003624_P001	Maize	cytosol	22.51	13.0
Zm00001d042738_P001	Maize	cytosol	22.08	12.5
Zm00001d016764_P001	Maize	extracellular	22.51	12.44
Zm00001d050712_P001	Maize	extracellular, plastid	21.64	12.22
Zm00001d016719_P001	Maize	cytosol	22.08	11.89
Zm00001d050689_P001	Maize	cytosol	21.64	11.65
Zm00001d003745_P001	Maize	nucleus	22.51	11.61
Zm00001d044734_P001	Maize	mitochondrion	22.08	11.54
Zm00001d016730_P001	Maize	cytosol	21.64	11.47
Zm00001d030251_P001	Maize	cytosol	20.78	10.81
Zm00001d017976_P001	Maize	mitochondrion	20.35	10.4
Zm00001d002498_P001	Maize	cytosol	18.61	10.36
Zm00001d026040_P001	Maize	cytosol	17.75	10.02
Zm00001d038280_P001	Maize	cytosol	19.48	9.96
Zm00001d025379_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	19.05	9.91
Zm00001d017671_P001	Maize	cytosol	17.75	9.65
Zm00001d028374_P001	Maize	mitochondrion	17.75	9.17
Zm00001d023480_P001	Maize	cytosol	19.91	8.23

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1X7YE91	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR003613	InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849
PANTHER:PTHR22849:SF6	SMART:SM00504	SUPFAM:SSF57850	UniParc:UPI00084499ED	InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d000044
EnsemblPlants:Zm00001d000044_P001	EnsemblPlants:Zm00001d000044_T001	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

U-box domain-containing protein 31

Coordinates

chrB73V4_ctg182:+:945691..947103

Molecular Weight (calculated)

24619.8 Da

IEP (calculated)

5.632

GRAVY (calculated)

-0.077

Length

231 amino acids

Sequence
(BLAST)

001: MGVTEGVQGG PSTREVSELD IDTTLKDGIL GGALEPVGAT AGNDGKQSME LCRMMDELDA AAGDDGGGDE AVPVVFICPI SLEPMVDPVT LCMGQMYERA
101: NISRWLALGH RTCPTTMQEL WDDALTTQRH PPAAHRRLVL PPPPRHDNAQ KAALKGQARV AALRELRTLA ASHQSVIKAI AKAGCVALLM SLLGPFTSLA
201: VGTEVVAISS AGCCLTLTQR PRSMQPWWQR D

Best Arabidopsis Sequence Match ( AT3G49810.1 )
(BLAST)

001: MPMFQPLKRD GLIGFEGGGD GQVLDLDTAV KDGVLGGVNG GGVGVVDEKL DLKKMIKELD LQDIPSVFIC PISLEPMQDP VTLCTGQTYE RLNIHKWFNL
101: GHLTCPTTMQ ELWDDTVTPN KTLHHLIYTW FSQKYVLMKK RSEDVQGRAI EILGTLKKAK GQARVHALSE LKQIVIAHLM ARKTVVEEGG VSVISSLLGP
201: FTSHAVGSEV VAILVSLDLD SDSKSGLMQP AKVSLIVDML NDGSNETKIN CARLIRGLVE EKGFRAELVS SHSLLVGLMR LVKDKRHRNG VSPALRLLKP
301: ISVHKQVRSL MVSIGAVPQL VDILPSLDPE CLELALFVLD ALCTDVEGRV AVKDSANTIP YTVRVLMRVS ENCTNYALSI LWSVCKLAPE ECSPLAVEVG
401: LAAKLLLVIQ SGCDAALKQR SAELLKLCSL HYSDTMFISK CKLTRTIQ

Arabidopsis Description

PUB30U-box domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q058P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.