Factsheet for GSMUA_Achr4P07400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P04940_001	Banana	cytosol	75.58	75.93
GSMUA_Achr2P08620_001	Banana	cytosol	74.19	74.19
GSMUA_Achr3P25750_001	Banana	cytosol	71.89	72.73
Zm00001d019807_P001	Maize	extracellular	14.29	65.96
VIT_00s0471g00010.t01	Wine grape	cytosol	63.59	61.74
VIT_18s0001g08790.t01	Wine grape	cytosol	64.06	61.5
CDX83098	Canola	cytosol	60.37	59.14
AT3G49810.1	Thale cress	cytosol	60.83	58.93
Bra029975.1-P	Field mustard	cytosol	59.91	58.69
CDY53333	Canola	cytosol	60.14	58.39
EER95229	Sorghum	cytosol	61.52	58.17
Zm00001d028294_P001	Maize	cytosol	61.06	57.73
Os03t0232600-01	Rice	cytosol	60.83	57.52
Zm00001d048008_P001	Maize	cytosol	61.29	57.45
AT5G65920.1	Thale cress	cytosol	58.29	56.98
HORVU4Hr1G066070.1	Barley	cytosol	60.37	56.96
CDY69247	Canola	cytosol	57.6	56.43
PGSC0003DMT400012566	Potato	cytosol	58.29	56.35
KRH55660	Soybean	cytosol	16.13	56.0
Bra037833.1-P	Field mustard	cytosol	57.14	55.98
CDY18670	Canola	cytosol	57.14	55.98
TraesCS4D01G237600.1	Wheat	cytosol	58.99	55.77
TraesCS4A01G060800.1	Wheat	cytosol	58.99	55.77
TraesCS4B01G236200.1	Wheat	cytosol	58.76	55.56
Solyc04g077610.2.1	Tomato	cytosol	53.46	55.37
Zm00001d000044_P001	Maize	cytosol	21.89	41.13
GSMUA_Achr7P03220_001	Banana	cytosol	20.28	28.39
GSMUA_Achr9P08750_001	Banana	cytosol, plasma membrane, plastid	22.35	28.12
GSMUA_Achr8P30400_001	Banana	cytosol	23.5	27.79
GSMUA_Achr10P...	Banana	cytosol	22.81	27.12
GSMUA_Achr5P01000_001	Banana	cytosol	21.43	26.2
GSMUA_Achr11P...	Banana	cytosol	22.12	25.74
GSMUA_Achr2P20690_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	23.04	24.94
GSMUA_Achr6P11310_001	Banana	cytosol	21.66	24.74
GSMUA_Achr6P02470_001	Banana	mitochondrion	21.66	24.74
GSMUA_Achr11P...	Banana	cytosol	20.74	24.59
GSMUA_Achr8P30420_001	Banana	mitochondrion	15.44	24.54
GSMUA_Achr1P13220_001	Banana	cytosol	22.35	24.49
GSMUA_Achr7P18640_001	Banana	mitochondrion	21.2	24.27
GSMUA_Achr6P25670_001	Banana	cytosol	23.5	23.83
GSMUA_Achr7P23310_001	Banana	cytosol, peroxisome, plastid	21.43	23.37
GSMUA_Achr3P18060_001	Banana	cytosol	20.51	23.36
GSMUA_Achr10P...	Banana	cytosol	20.05	23.14
GSMUA_Achr6P18140_001	Banana	cytosol	21.66	22.98
GSMUA_Achr11P...	Banana	mitochondrion	22.35	22.82
GSMUA_Achr5P01020_001	Banana	cytosol	20.97	22.69
GSMUA_Achr10P...	Banana	plastid	19.82	22.4
GSMUA_Achr3P02030_001	Banana	plastid	21.43	22.2
GSMUA_Achr1P16250_001	Banana	cytosol	20.28	21.62
GSMUA_Achr5P13860_001	Banana	cytosol	13.82	19.8
GSMUA_Achr9P29630_001	Banana	cytosol	22.35	15.7

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G07400_001	EnsemblPlants:GSMUA_Achr4P07400_001
EnsemblPlants:GSMUA_Achr4T07400_001	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:M0SLV7	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF6	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000296B427	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

U-box domain-containing protein 31 [Source:GMGC_GENE;Acc:GSMUA_Achr4G07400_001]

Coordinates

chr4:-:5497755..5499122

Molecular Weight (calculated)

47465.1 Da

IEP (calculated)

5.709

GRAVY (calculated)

0.132

Length

434 amino acids

Sequence
(BLAST)

001: MPQFQQPACW RLEAGGQVMD VDTAVKDGIL GGGAVISGLL DGKDGTLGTA KKHDLKEMIE EMDSAAEAND VPIVFICPIS LEPMVDPVTL CTGQTYERVN
101: ILRWFSTGRL TCPTTMQDLW DDTVTPNRTL HQLIHAWFSQ RYLRLMKRSK DVEGRARELI VAAHPSIEKP VIDSGVLGIL SSLLGPFTSH AVGSEVIAVL
201: VNLNLDSEAM TDLMQPAKIS LVVDMLNEGT TKTKIQCARF IEVLMGAESF RFEIVSSLSL LVGLVRMVKD KREPDGVSAG LSLLKTICSH DQVRSSIVSI
301: RAVAQLVERL PDLSPNSLES ALQILDDLAA IPDGRSALKD CPQTIPNTVR PLMKVSEACT RHALSILWAV CKLAPEEFVY LAVEAGLATR LLLVIQSDCP
401: PELKKQASDL LKLCSLNYTA TLFISKCKLT RTMQ

Best Arabidopsis Sequence Match ( AT3G49810.1 )
(BLAST)

001: MPMFQPLKRD GLIGFEGGGD GQVLDLDTAV KDGVLGGVNG GGVGVVDEKL DLKKMIKELD LQDIPSVFIC PISLEPMQDP VTLCTGQTYE RLNIHKWFNL
101: GHLTCPTTMQ ELWDDTVTPN KTLHHLIYTW FSQKYVLMKK RSEDVQGRAI EILGTLKKAK GQARVHALSE LKQIVIAHLM ARKTVVEEGG VSVISSLLGP
201: FTSHAVGSEV VAILVSLDLD SDSKSGLMQP AKVSLIVDML NDGSNETKIN CARLIRGLVE EKGFRAELVS SHSLLVGLMR LVKDKRHRNG VSPALRLLKP
301: ISVHKQVRSL MVSIGAVPQL VDILPSLDPE CLELALFVLD ALCTDVEGRV AVKDSANTIP YTVRVLMRVS ENCTNYALSI LWSVCKLAPE ECSPLAVEVG
401: LAAKLLLVIQ SGCDAALKQR SAELLKLCSL HYSDTMFISK CKLTRTIQ

Arabidopsis Description

PUB30U-box domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q058P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.