Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69247 | Canola | cytosol | 84.23 | 84.42 |
| CDY18670 | Canola | cytosol | 83.78 | 83.97 |
| Bra037833.1-P | Field mustard | cytosol | 83.56 | 83.75 |
| AT3G49810.1 | Thale cress | cytosol | 82.21 | 81.47 |
| VIT_00s0471g00010.t01 | Wine grape | cytosol | 73.87 | 73.38 |
| KRH77156 | Soybean | cytosol | 70.95 | 70.16 |
| KRH58142 | Soybean | cytosol | 67.57 | 67.57 |
| GSMUA_Achr8P04940_001 | Banana | cytosol | 64.19 | 65.97 |
| GSMUA_Achr2P08620_001 | Banana | cytosol | 63.06 | 64.52 |
| GSMUA_Achr3P25750_001 | Banana | cytosol | 60.81 | 62.94 |
| Zm00001d019807_P001 | Maize | extracellular | 13.29 | 62.77 |
| KRH28330 | Soybean | plastid | 70.95 | 61.28 |
| GSMUA_Achr4P07400_001 | Banana | cytosol | 56.98 | 58.29 |
| EER95229 | Sorghum | cytosol | 57.88 | 55.99 |
| Zm00001d028294_P001 | Maize | cytosol | 57.21 | 55.34 |
| Zm00001d048008_P001 | Maize | cytosol | 57.66 | 55.29 |
| Os03t0232600-01 | Rice | cytosol | 56.98 | 55.12 |
| HORVU4Hr1G066070.1 | Barley | cytosol | 56.53 | 54.57 |
| TraesCS4D01G237600.1 | Wheat | cytosol | 56.08 | 54.25 |
| TraesCS4A01G060800.1 | Wheat | cytosol | 56.08 | 54.25 |
| TraesCS4B01G236200.1 | Wheat | cytosol | 55.86 | 54.03 |
| Zm00001d000044_P001 | Maize | cytosol | 20.95 | 40.26 |
| AT3G19380.1 | Thale cress | cytosol, golgi, plastid | 25.68 | 27.08 |
| AT1G49780.1 | Thale cress | cytoskeleton, cytosol, vacuole | 24.32 | 25.65 |
| AT5G64660.1 | Thale cress | cytosol | 23.87 | 25.24 |
| AT2G35930.1 | Thale cress | cytosol | 22.3 | 24.09 |
| AT3G52450.1 | Thale cress | cytosol | 22.97 | 23.45 |
| AT1G66160.1 | Thale cress | cytosol | 22.75 | 23.43 |
| AT3G18710.1 | Thale cress | cytosol | 21.85 | 23.37 |
| AT5G09800.1 | Thale cress | cytosol | 21.4 | 23.23 |
| AT3G11840.1 | Thale cress | cytosol | 22.97 | 22.37 |
| AT5G37490.1 | Thale cress | cytosol, nucleus, peroxisome | 21.62 | 22.07 |
| AT3G02840.1 | Thale cress | mitochondrion | 17.79 | 20.84 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:836721 | ProteinID:AED98123.1 | ProteinID:ANM68939.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT5G65920 | EnsemblPlantsGene:AT5G65920 | RefSeq:AT5G65920 | TAIR:AT5G65920 |
| RefSeq:AT5G65920-TAIR-G | EnsemblPlants:AT5G65920.1 | TAIR:AT5G65920.1 | EMBL:AY062476 | EMBL:AY093259 | ProteinID:BAB11139.1 |
| ProteinID:CAA16672.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | RefSeq:NP_001330653.1 | RefSeq:NP_201393.1 | PFAM:PF04564 |
| PO:PO:0000293 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF105 | UniProt:Q9FHN9 | SMART:SM00504 |
| SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI00000AA0FA | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
PUB31U-box domain-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN9]
Coordinates
chr5:-:26363709..26366065
Molecular Weight (calculated)
48876.4 Da
IEP (calculated)
8.091
GRAVY (calculated)
0.146
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMFQPSKNG GFDGHILDLH SAVKDGVLGG GDGKFLVVVT DEKKKLDLKE MISELELPEI PSVFICPISL EPMQDPVTLC TGQTYERSNI LKWFNIGHCT
101: CPTTMQELWD DLVTPNKTLH QLIYTWFSQK YVLMKKRSED VQGRAIEILG TLRKAKGKAK VHALSELKQV VMAHAIAKKT VVDEGGVFVI SSLLSPFTSH
201: AVGSEAIAIL VNLELDSDSK AGLMQPARVS LMVDMLNDGS IETKINCARL IGRLVEEKGF RAELVSSHSL LVGLMRLVKD RRRRNGVSPA LTLLKSVSVH
301: KQVRNLLVRI GAVPQLVDVL PCLDVECLES ALFVLDSLCL ESEGRIALKD SVNTIPHTVR LLMKVSEKCT NYAISILWSV CKLASEECSS LAVEVGLAAK
401: LLLVIQSGCD PALKQRSAEL LKLCSLHYSD SMFISKCKLT RTIQ
101: CPTTMQELWD DLVTPNKTLH QLIYTWFSQK YVLMKKRSED VQGRAIEILG TLRKAKGKAK VHALSELKQV VMAHAIAKKT VVDEGGVFVI SSLLSPFTSH
201: AVGSEAIAIL VNLELDSDSK AGLMQPARVS LMVDMLNDGS IETKINCARL IGRLVEEKGF RAELVSSHSL LVGLMRLVKD RRRRNGVSPA LTLLKSVSVH
301: KQVRNLLVRI GAVPQLVDVL PCLDVECLES ALFVLDSLCL ESEGRIALKD SVNTIPHTVR LLMKVSEKCT NYAISILWSV CKLASEECSS LAVEVGLAAK
401: LLLVIQSGCD PALKQRSAEL LKLCSLHYSD SMFISKCKLT RTIQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.