Factsheet for Os03t0232600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G066070.1	Barley	cytosol	91.5	91.3
TraesCS4A01G060800.1	Wheat	cytosol	91.07	91.07
TraesCS4B01G236200.1	Wheat	cytosol	90.85	90.85
TraesCS4D01G237600.1	Wheat	cytosol	90.85	90.85
EER95229	Sorghum	cytosol	89.76	89.76
Zm00001d028294_P001	Maize	cytosol	89.76	89.76
Zm00001d048008_P001	Maize	cytosol	89.11	88.34
Zm00001d019807_P001	Maize	extracellular	16.56	80.85
GSMUA_Achr8P04940_001	Banana	cytosol	63.4	67.36
GSMUA_Achr2P08620_001	Banana	cytosol	62.53	66.13
GSMUA_Achr3P25750_001	Banana	cytosol	59.26	63.4
VIT_00s0471g00010.t01	Wine grape	cytosol	59.7	61.3
CDX83098	Canola	cytosol	59.04	61.17
Zm00001d000044_P001	Maize	cytosol	30.72	61.04
AT3G49810.1	Thale cress	cytosol	59.48	60.94
GSMUA_Achr4P07400_001	Banana	cytosol	57.52	60.83
Bra029975.1-P	Field mustard	cytosol	58.61	60.72
KRH77156	Soybean	cytosol	59.26	60.58
VIT_18s0001g08790.t01	Wine grape	cytosol	59.04	59.96
CDY53333	Canola	cytosol	58.39	59.96
KRH58142	Soybean	cytosol	57.73	59.68
Solyc04g077610.2.1	Tomato	cytosol	53.81	58.95
CDY18670	Canola	cytosol	56.86	58.92
Bra037833.1-P	Field mustard	cytosol	56.86	58.92
CDY69247	Canola	cytosol	56.64	58.69
PGSC0003DMT400012566	Potato	cytosol	56.86	58.13
AT5G65920.1	Thale cress	cytosol	55.12	56.98
KRH52124	Soybean	cytosol	51.63	55.76
KRH61438	Soybean	cytosol	51.2	55.69
KRG88755	Soybean	cytosol	50.98	54.42
KRH05554	Soybean	cytosol	49.02	53.7
KRH28330	Soybean	plastid	59.26	52.92
KRH55660	Soybean	cytosol	14.16	52.0
Os01t0865700-00	Rice	plastid	26.58	29.98
Os04t0686000-01	Rice	cytosol	26.58	29.54
Os02t0540700-00	Rice	plastid	29.41	26.73
Os06t0248500-00	Rice	mitochondrion	26.14	26.49
Os04t0418500-01	Rice	plastid	25.93	26.39
Os02t0539200-01	Rice	cytosol	25.27	26.24
Os04t0437300-01	Rice	cytosol	24.18	26.06
Os02t0548700-00	Rice	cytosol, extracellular, plastid	23.09	25.42
Os02t0738200-01	Rice	mitochondrion	23.75	23.9
Os03t0240600-01	Rice	plastid	22.88	23.6
Os04t0589700-01	Rice	cytosol	20.91	22.8
Os02t0690600-01	Rice	cytosol	20.91	22.59
Os12t0161100-00	Rice	cytosol	21.57	22.55
Os05t0439400-01	Rice	plasma membrane	20.48	20.8

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:4332159	ProteinID:AAM19135.1	ProteinID:ABF94807.1
EMBL:AK068218	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAF11383.2	ProteinID:BAS83120.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016567	GO:GO:0016740
GO:GO:0016874	GO:GO:0019538	GO:GO:0061630	GO:GO:1900457	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	EnsemblPlantsGene:Os03g0232600	EnsemblPlants:Os03t0232600-01	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849
PANTHER:PTHR22849:SF6	UniProt:Q10PI9	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0000DB48F3
InterPro:Ubox_domain	RefSeq:XP_015632077.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

ERECT LEAF 1U-Box E3 ubiquitin ligase, Regulation of brassinosteroid-mediated growth (Os03t0232600-01)

Coordinates

chr3:-:7029174..7031611

Molecular Weight (calculated)

48861.1 Da

IEP (calculated)

7.308

GRAVY (calculated)

0.180

Length

459 amino acids

Sequence
(BLAST)

001: MPQYQELPCG GQVLDIDTAL KDGILGGGPE LGDAAAGDGG KQPVELRKMM DELDAAGDGG GDEAVPAVFI CPISLEPMVD PVTLCTGQTY ESANISRWLA
101: LGHRTCPTTM QELWDVTPIP NTTLRQLIAA WFSRRYTRFK KRSADFHGRA AELVHALRGT AVPKRQPLKG QARVAALREL RSLAAAHQSV TKAIAEAGGV
201: GLLTSLLGPF TSHAVGSEAV AILVSGVPLD ADAKAALMQP AKVSLLVDML NEGAVDTKIN CVRLIRILME EKGFRPDTVA SLSLLVGVMR LVRDKRHPDG
301: VAAGLELLNS ICAVHKPARS LIVSIGAVPQ LVELLPELPT ECVEPALDIL DALAAVPEGR IALKDCPRTI TNAVRLLMRV SEACTRRALS MLWVVCRMAP
401: EECAPAALDA GLGAKLLLVI QSGCGPELKQ QASELLKLCT MNCTSTVFIS KCKLTKTIQ

Best Arabidopsis Sequence Match ( AT3G49810.1 )
(BLAST)

001: MPMFQPLKRD GLIGFEGGGD GQVLDLDTAV KDGVLGGVNG GGVGVVDEKL DLKKMIKELD LQDIPSVFIC PISLEPMQDP VTLCTGQTYE RLNIHKWFNL
101: GHLTCPTTMQ ELWDDTVTPN KTLHHLIYTW FSQKYVLMKK RSEDVQGRAI EILGTLKKAK GQARVHALSE LKQIVIAHLM ARKTVVEEGG VSVISSLLGP
201: FTSHAVGSEV VAILVSLDLD SDSKSGLMQP AKVSLIVDML NDGSNETKIN CARLIRGLVE EKGFRAELVS SHSLLVGLMR LVKDKRHRNG VSPALRLLKP
301: ISVHKQVRSL MVSIGAVPQL VDILPSLDPE CLELALFVLD ALCTDVEGRV AVKDSANTIP YTVRVLMRVS ENCTNYALSI LWSVCKLAPE ECSPLAVEVG
401: LAAKLLLVIQ SGCDAALKQR SAELLKLCSL HYSDTMFISK CKLTRTIQ

Arabidopsis Description

PUB30U-box domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q058P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.