Factsheet for Os01t0865700-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0827500-01	golgi
Os01t0827600-01	golgi
Os02t0758000-01
Os05t0473500-01	golgi
Os06t0219500-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G35930.1	Os02t0758000-01	AT4G25200.1	21798944
AT2G35930.1	Os06t0219500-00	AT4G25200.1	21798944
AT3G52450.1	Os01t0827500-01	AT1G07000.1	23170036
AT3G52450.1	Os01t0827600-01	AT1G07000.1	23170036
AT3G52450.1	Os05t0473500-01	AT1G07000.1	23170036
AT3G52450.1	Os01t0827500-01	AT1G07000.1	23170036
AT3G52450.1	Os01t0827600-01	AT1G07000.1	23170036
AT3G52450.1	Os05t0473500-01	AT1G07000.1	23170036

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G083500.1	Barley	cytosol	86.24	84.99
TraesCS3B01G409400.1	Wheat	cytosol	86.98	84.89
TraesCS3D01G370000.1	Wheat	cytosol	86.98	84.69
TraesCS3A01G376900.1	Wheat	cytosol	86.73	84.45
EES03937	Sorghum	plastid	79.12	78.92
Zm00001d042738_P001	Maize	cytosol	76.9	76.72
GSMUA_Achr7P03220_001	Banana	cytosol	43.49	57.1
GSMUA_Achr5P01000_001	Banana	cytosol	46.44	53.24
Os04t0686000-01	Rice	cytosol	53.07	52.3
PGSC0003DMT400055045	Potato	cytosol	25.06	48.34
Solyc01g007030.2.1	Tomato	cytosol	25.06	48.34
KRH22633	Soybean	cytosol, nucleus	45.45	45.91
Os02t0539200-01	Rice	cytosol	49.39	45.48
KRH26691	Soybean	cytosol	43.0	45.22
Solyc11g068920.1.1	Tomato	cytosol	44.23	44.55
VIT_08s0105g00180.t01	Wine grape	cytosol, plastid, vacuole	44.72	44.28
CDX95337	Canola	cytosol	44.47	44.25
VIT_06s0009g00320.t01	Wine grape	cytosol	44.96	44.2
VIT_08s0105g00190.t01	Wine grape	cytosol, plastid, vacuole	44.47	44.04
CDX78096	Canola	cytosol	42.01	43.96
CDX75084	Canola	cytosol	43.73	43.84
PGSC0003DMT400050493	Potato	cytosol	43.49	43.81
KRH25324	Soybean	cytosol	39.07	43.8
AT2G35930.1	Thale cress	cytosol	44.23	43.8
Bra005309.1-P	Field mustard	cytosol	41.52	43.67
CDX79645	Canola	cytosol	43.73	43.63
CDX84168	Canola	cytosol	43.24	43.35
KRH32856	Soybean	cytosol	44.72	43.33
CDY32070	Canola	cytosol	43.73	43.2
CDX84587	Canola	cytosol	43.24	43.03
CDY59599	Canola	cytosol	43.24	43.03
Bra023044.1-P	Field mustard	cytosol	43.24	43.03
CDY40422	Canola	cytosol	43.49	42.96
Bra017278.1-P	Field mustard	cytosol	43.49	42.96
PGSC0003DMT400054949	Potato	cytosol	42.75	42.86
KRH72176	Soybean	cytosol	43.98	42.82
Solyc01g007000.2.1	Tomato	cytosol, nucleus, vacuole	42.75	42.54
Solyc01g009330.1.1	Tomato	cytosol	44.47	42.49
CDY23218	Canola	cytosol	41.28	42.42
KRH68014	Soybean	cytosol	43.49	42.14
PGSC0003DMT400055049	Potato	cytosol, nucleus, plasma membrane	42.01	42.12
PGSC0003DMT400055050	Potato	cytosol	40.54	42.09
PGSC0003DMT400055051	Potato	cytosol	40.54	41.88
KRH35744	Soybean	cytosol	43.0	41.77
Bra012803.1-P	Field mustard	cytosol	43.24	41.61
Solyc01g007020.2.1	Tomato	cytosol	41.52	41.42
KRG96257	Soybean	cytosol	42.51	41.29
Solyc01g007010.2.1	Tomato	cytosol	41.28	41.18
KRG96268	Soybean	cytosol	42.26	41.05
Bra033430.1-P	Field mustard	cytosol	42.51	40.8
Bra006925.1-P	Field mustard	cytosol	43.49	40.69
AT3G52450.1	Thale cress	cytosol	43.0	40.23
PGSC0003DMT400054947	Potato	cytosol	29.73	40.07
PGSC0003DMT400038197	Potato	cytosol	43.73	39.21
PGSC0003DMT400054948	Potato	cytosol	25.31	36.14
Solyc01g007040.2.1	Tomato	cytosol, nucleus, vacuole	15.48	35.2
Os12t0161100-00	Rice	cytosol	36.61	33.94
Os02t0690600-01	Rice	cytosol	32.19	30.82
GSMUA_Achr9P29630_001	Banana	cytosol	45.95	30.26
Os02t0548700-00	Rice	cytosol, extracellular, plastid	30.71	29.98
Os06t0248500-00	Rice	mitochondrion	33.17	29.8
Os04t0589700-01	Rice	cytosol	30.71	29.69
Os02t0738200-01	Rice	mitochondrion	32.92	29.39
Os03t0240600-01	Rice	plastid	30.96	28.31
Os04t0437300-01	Rice	cytosol	28.5	27.23
Os03t0232600-01	Rice	cytosol	29.98	26.58
Os04t0418500-01	Rice	plastid	28.99	26.16
Os05t0439400-01	Rice	plasma membrane	27.27	24.56
Os02t0540700-00	Rice	plastid	30.22	24.36

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:4324796	UniProt:A0A0P0VAX7	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	ProteinID:BAS75378.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	EnsemblPlantsGene:Os01g0865700	EnsemblPlants:Os01t0865700-00	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF66	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000393934E	InterPro:Ubox_domain	RefSeq:XP_015619864.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

plant U-box-containing protein 31, U-box protein 31Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0865700-00)

Coordinates

chr1:-:37464074..37465567

Molecular Weight (calculated)

43052.3 Da

IEP (calculated)

8.439

GRAVY (calculated)

0.247

Length

407 amino acids

Sequence
(BLAST)

001: MAAMASAAAE VPSYFVCPIS LQLMRDPVTL PTGISYDRAA IARWLAAPGA RRTCPVTRQP LEHGLELTPN HTLRRLIQSW AASVSPGSAV DEEVAALRPV
101: SSDEVASLLS DAAAAQVGAL RRLRELAAEC EDSRAMLESQ GGVFDVLSRV VTSGSACSTA REEAVGVLAS LRIPEQELIG VSTRHGNLAE SLTAVLRSSN
201: LQSRAHAVQL VRTLADAVVP AWVIGLNAEL LAEVVGVVRD RVSARATKAS LHALAALCPY GRHRVKIVGA GAVAALVELL LDEPERRVCE LALAVLDRLC
301: TCAEGRAELV AHAAGVAVVG KKVLRVSEAA SERAVRVLRS VARHAATPAV LQEMAQCGVV GKLCLALRSE QCGVKTKEKA HEVLKLHSRV WRASPCLSPS
401: FLALYPS

Best Arabidopsis Sequence Match ( AT2G35930.1 )
(BLAST)

001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C

Arabidopsis Description

PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.