Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042738_P001 | Maize | cytosol | 93.63 | 93.63 |
| Os01t0865700-00 | Rice | plastid | 78.92 | 79.12 |
| TraesCS3D01G370000.1 | Wheat | cytosol | 80.39 | 78.47 |
| HORVU3Hr1G083500.1 | Barley | cytosol | 79.41 | 78.45 |
| TraesCS3B01G409400.1 | Wheat | cytosol | 80.15 | 78.42 |
| TraesCS3A01G376900.1 | Wheat | cytosol | 79.9 | 77.99 |
| GSMUA_Achr7P03220_001 | Banana | cytosol | 41.91 | 55.16 |
| GSMUA_Achr5P01000_001 | Banana | cytosol | 44.61 | 51.27 |
| EES13136 | Sorghum | cytosol | 50.25 | 48.12 |
| OQU85086 | Sorghum | cytosol | 50.0 | 47.78 |
| EES06927 | Sorghum | cytosol | 49.26 | 47.41 |
| PGSC0003DMT400055045 | Potato | cytosol | 24.51 | 47.39 |
| Solyc01g007030.2.1 | Tomato | cytosol | 24.51 | 47.39 |
| KRH22633 | Soybean | cytosol, nucleus | 44.61 | 45.16 |
| KRH26691 | Soybean | cytosol | 42.16 | 44.44 |
| AT2G35930.1 | Thale cress | cytosol | 44.36 | 44.04 |
| CDX79645 | Canola | cytosol | 43.63 | 43.63 |
| CDX75084 | Canola | cytosol | 43.38 | 43.6 |
| VIT_08s0105g00180.t01 | Wine grape | cytosol, plastid, vacuole | 43.87 | 43.55 |
| CDX95337 | Canola | cytosol | 43.63 | 43.52 |
| VIT_08s0105g00190.t01 | Wine grape | cytosol, plastid, vacuole | 43.63 | 43.31 |
| VIT_06s0009g00320.t01 | Wine grape | cytosol | 43.87 | 43.24 |
| Bra005309.1-P | Field mustard | cytosol | 40.93 | 43.15 |
| CDX84168 | Canola | cytosol | 42.89 | 43.1 |
| CDX78096 | Canola | cytosol | 40.93 | 42.93 |
| Solyc11g068920.1.1 | Tomato | cytosol | 42.4 | 42.82 |
| Bra023044.1-P | Field mustard | cytosol | 42.89 | 42.79 |
| CDX84587 | Canola | cytosol | 42.89 | 42.79 |
| CDY32070 | Canola | cytosol | 43.14 | 42.72 |
| CDY59599 | Canola | cytosol | 42.65 | 42.54 |
| Bra017278.1-P | Field mustard | cytosol | 42.89 | 42.48 |
| CDY40422 | Canola | cytosol | 42.89 | 42.48 |
| KRH25324 | Soybean | cytosol | 37.5 | 42.15 |
| PGSC0003DMT400050493 | Potato | cytosol | 41.67 | 42.08 |
| CDY23218 | Canola | cytosol | 40.44 | 41.67 |
| KRH32856 | Soybean | cytosol | 42.65 | 41.43 |
| KRH68014 | Soybean | cytosol | 42.65 | 41.43 |
| Bra012803.1-P | Field mustard | cytosol | 42.89 | 41.37 |
| KRG96257 | Soybean | cytosol | 42.4 | 41.29 |
| AT3G52450.1 | Thale cress | cytosol | 43.87 | 41.15 |
| KRH72176 | Soybean | cytosol | 42.16 | 41.15 |
| KRG96268 | Soybean | cytosol | 42.16 | 41.05 |
| KRH35744 | Soybean | cytosol | 41.67 | 40.57 |
| Bra033430.1-P | Field mustard | cytosol | 42.16 | 40.57 |
| PGSC0003DMT400054949 | Potato | cytosol | 39.95 | 40.15 |
| PGSC0003DMT400054947 | Potato | cytosol | 29.66 | 40.07 |
| Bra006925.1-P | Field mustard | cytosol | 42.65 | 40.0 |
| Solyc01g007000.2.1 | Tomato | cytosol, nucleus, vacuole | 39.95 | 39.85 |
| PGSC0003DMT400055050 | Potato | cytosol | 38.24 | 39.8 |
| PGSC0003DMT400055049 | Potato | cytosol, nucleus, plasma membrane | 39.46 | 39.66 |
| Solyc01g007020.2.1 | Tomato | cytosol | 39.46 | 39.46 |
| Solyc01g009330.1.1 | Tomato | cytosol | 41.18 | 39.44 |
| PGSC0003DMT400055051 | Potato | cytosol | 37.99 | 39.34 |
| Solyc01g007010.2.1 | Tomato | cytosol | 38.97 | 38.97 |
| KXG26241 | Sorghum | cytosol | 44.12 | 38.96 |
| PGSC0003DMT400038197 | Potato | cytosol | 40.93 | 36.78 |
| PGSC0003DMT400054948 | Potato | cytosol | 23.28 | 33.33 |
| EES11341 | Sorghum | cytosol | 32.84 | 32.52 |
| Solyc01g007040.2.1 | Tomato | cytosol, nucleus, vacuole | 13.73 | 31.28 |
| KXG23010 | Sorghum | cytosol | 34.56 | 31.06 |
| EES07426 | Sorghum | cytosol | 31.13 | 29.6 |
| KXG19704 | Sorghum | mitochondrion | 32.84 | 29.19 |
| EES06938 | Sorghum | extracellular | 28.68 | 28.75 |
| GSMUA_Achr9P29630_001 | Banana | cytosol | 43.14 | 28.48 |
| EES05563 | Sorghum | mitochondrion | 32.11 | 28.36 |
| OQU81614 | Sorghum | cytosol | 27.21 | 27.89 |
| EES05205 | Sorghum | cytosol | 30.15 | 27.15 |
| OQU80253 | Sorghum | mitochondrion | 14.46 | 27.06 |
| OQU81292 | Sorghum | mitochondrion | 13.97 | 26.51 |
| EER95229 | Sorghum | cytosol | 29.41 | 26.14 |
| OQU81548 | Sorghum | mitochondrion | 28.19 | 25.73 |
| EER92576 | Sorghum | mitochondrion | 28.43 | 25.55 |
| KXG38738 | Sorghum | plastid | 30.64 | 25.3 |
| KXG22102 | Sorghum | mitochondrion | 25.49 | 22.76 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:8062374 | InterPro:ARM-like | InterPro:ARM-type_fold |
| UniProt:C5XQM1 | ncoils:Coil | EnsemblPlants:EES03937 | ProteinID:EES03937 | ProteinID:EES03937.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR003613 | InterPro:IPR011989 |
| InterPro:IPR013083 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF66 | SMART:SM00504 |
| EnsemblPlantsGene:SORBI_3003G367000 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI0001A85275 | InterPro:Ubox_domain | RefSeq:XP_002458817.1 |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:68325094..68326611
Molecular Weight (calculated)
43425.6 Da
IEP (calculated)
8.578
GRAVY (calculated)
0.141
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAPAGEVP SHFLCPISLQ LMREPVTLPT GISYDRAAIS RWLAAPAPAG GRTCPVTRVP LPPQPQLTPN HTLRRLIHAW LASLSPEAEV DEDVAALRRP
101: VPGAEVAALL SHAAAAQVEA LKRLRELVAE CEDNRAVLES QDGVFDALSR VVSSADACST AREEAVGVLA SLRIPEPELA AVVARHSNLG EALTAVLRSS
201: NVKSRANAAL LVRSLSEAAW PAWVIGLSQE LLAEVVRVVR DRVSTQATKA ALHALAALCP YGRTRVKIVG AGSVPAIVDL LLDDPERRVN EVALVALDRL
301: CTCAEGRAEL VAHAAGLAVV GKKVLRVSEA ASERAVRVLR SVARHAATPA VLQEMAQSGV VAKLCAALRS EQCGVRTKER AHEVLKLHSR TWRSSPCLSP
401: KFLELYPS
101: VPGAEVAALL SHAAAAQVEA LKRLRELVAE CEDNRAVLES QDGVFDALSR VVSSADACST AREEAVGVLA SLRIPEPELA AVVARHSNLG EALTAVLRSS
201: NVKSRANAAL LVRSLSEAAW PAWVIGLSQE LLAEVVRVVR DRVSTQATKA ALHALAALCP YGRTRVKIVG AGSVPAIVDL LLDDPERRVN EVALVALDRL
301: CTCAEGRAEL VAHAAGLAVV GKKVLRVSEA ASERAVRVLR SVARHAATPA VLQEMAQSGV VAKLCAALRS EQCGVRTKER AHEVLKLHSR TWRSSPCLSP
401: KFLELYPS
001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
Arabidopsis Description
PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.