Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0161100-00 | Rice | cytosol | 63.88 | 66.06 |
| TraesCS6B01G209000.1 | Wheat | cytosol | 60.57 | 65.01 |
| TraesCS6D01G167300.1 | Wheat | cytosol | 61.45 | 64.43 |
| TraesCS6A01G176800.1 | Wheat | cytosol | 61.23 | 64.35 |
| HORVU6Hr1G034250.1 | Barley | cytosol, nucleus, peroxisome | 60.79 | 63.74 |
| Zm00001d023480_P001 | Maize | cytosol | 70.26 | 57.07 |
| GSMUA_Achr7P03220_001 | Banana | cytosol | 27.75 | 40.65 |
| GSMUA_Achr5P01000_001 | Banana | cytosol | 28.63 | 36.62 |
| KRH22633 | Soybean | cytosol, nucleus | 31.28 | 35.24 |
| Solyc01g007030.2.1 | Tomato | cytosol | 16.3 | 35.07 |
| EES03937 | Sorghum | plastid | 31.06 | 34.56 |
| PGSC0003DMT400055045 | Potato | cytosol | 15.86 | 34.12 |
| CDX95337 | Canola | cytosol | 30.62 | 33.99 |
| EES13136 | Sorghum | cytosol | 31.5 | 33.57 |
| KRH26691 | Soybean | cytosol | 28.41 | 33.33 |
| CDX78096 | Canola | cytosol | 28.41 | 33.16 |
| VIT_06s0009g00320.t01 | Wine grape | cytosol | 30.18 | 33.09 |
| CDY23218 | Canola | cytosol | 28.85 | 33.08 |
| KRH25324 | Soybean | cytosol | 26.43 | 33.06 |
| CDY32070 | Canola | cytosol | 29.96 | 33.01 |
| CDY40422 | Canola | cytosol | 29.96 | 33.01 |
| Bra017278.1-P | Field mustard | cytosol | 29.96 | 33.01 |
| CDX75084 | Canola | cytosol | 29.52 | 33.0 |
| CDX84168 | Canola | cytosol | 29.52 | 33.0 |
| Bra005309.1-P | Field mustard | cytosol | 27.97 | 32.82 |
| OQU85086 | Sorghum | cytosol | 30.84 | 32.79 |
| Bra023044.1-P | Field mustard | cytosol | 29.52 | 32.76 |
| CDX84587 | Canola | cytosol | 29.52 | 32.76 |
| EES06927 | Sorghum | cytosol | 30.4 | 32.55 |
| KRH72176 | Soybean | cytosol | 29.96 | 32.54 |
| CDY59599 | Canola | cytosol | 29.3 | 32.52 |
| Solyc01g007040.2.1 | Tomato | cytosol, nucleus, vacuole | 12.78 | 32.4 |
| KRH32856 | Soybean | cytosol | 29.96 | 32.38 |
| AT2G35930.1 | Thale cress | cytosol | 29.3 | 32.36 |
| EES11341 | Sorghum | cytosol | 29.3 | 32.28 |
| VIT_08s0105g00190.t01 | Wine grape | cytosol, plastid, vacuole | 29.07 | 32.12 |
| VIT_08s0105g00180.t01 | Wine grape | cytosol, plastid, vacuole | 29.07 | 32.12 |
| CDX79645 | Canola | cytosol | 28.85 | 32.11 |
| PGSC0003DMT400055051 | Potato | cytosol | 27.75 | 31.98 |
| PGSC0003DMT400050493 | Potato | cytosol | 28.41 | 31.93 |
| Solyc11g068920.1.1 | Tomato | cytosol | 28.41 | 31.93 |
| PGSC0003DMT400055050 | Potato | cytosol | 27.53 | 31.89 |
| Solyc01g007000.2.1 | Tomato | cytosol, nucleus, vacuole | 28.63 | 31.78 |
| KRH68014 | Soybean | cytosol | 29.3 | 31.67 |
| Solyc01g007010.2.1 | Tomato | cytosol | 28.41 | 31.62 |
| PGSC0003DMT400054949 | Potato | cytosol | 28.19 | 31.53 |
| Bra033430.1-P | Field mustard | cytosol | 29.3 | 31.37 |
| Bra012803.1-P | Field mustard | cytosol | 29.07 | 31.21 |
| KRH35744 | Soybean | cytosol | 28.41 | 30.79 |
| Solyc01g009330.1.1 | Tomato | cytosol | 28.85 | 30.75 |
| Bra006925.1-P | Field mustard | cytosol | 29.3 | 30.57 |
| KRG96257 | Soybean | cytosol | 28.19 | 30.55 |
| PGSC0003DMT400055049 | Potato | cytosol, nucleus, plasma membrane | 27.31 | 30.54 |
| AT3G52450.1 | Thale cress | cytosol | 29.07 | 30.34 |
| KRG96268 | Soybean | cytosol | 27.97 | 30.31 |
| KXG26241 | Sorghum | cytosol | 30.62 | 30.09 |
| Solyc01g007020.2.1 | Tomato | cytosol | 26.87 | 29.9 |
| EES07426 | Sorghum | cytosol | 27.31 | 28.9 |
| OQU80253 | Sorghum | mitochondrion | 13.88 | 28.9 |
| PGSC0003DMT400038197 | Potato | cytosol | 28.63 | 28.63 |
| PGSC0003DMT400054947 | Potato | cytosol | 18.5 | 27.81 |
| OQU81292 | Sorghum | mitochondrion | 12.78 | 26.98 |
| PGSC0003DMT400054948 | Potato | cytosol | 16.74 | 26.67 |
| EES06938 | Sorghum | extracellular | 23.79 | 26.54 |
| OQU81614 | Sorghum | cytosol | 22.47 | 25.63 |
| KXG19704 | Sorghum | mitochondrion | 24.45 | 24.18 |
| EER92576 | Sorghum | mitochondrion | 24.01 | 24.01 |
| EER95229 | Sorghum | cytosol | 23.13 | 22.88 |
| EES05205 | Sorghum | cytosol | 22.69 | 22.74 |
| KXG22102 | Sorghum | mitochondrion | 22.69 | 22.54 |
| EES05563 | Sorghum | mitochondrion | 22.47 | 22.08 |
| GSMUA_Achr9P29630_001 | Banana | cytosol | 29.3 | 21.52 |
| KXG38738 | Sorghum | plastid | 22.91 | 21.05 |
| OQU81548 | Sorghum | mitochondrion | 20.48 | 20.81 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1B6PB84 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR003613 | InterPro:IPR013083 | EnsemblPlants:KXG23010 |
| ProteinID:KXG23010 | ProteinID:KXG23010.1 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF30 |
| SMART:SM00504 | EnsemblPlantsGene:SORBI_3008G044300 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI00081ABDAA | InterPro:Ubox_domain |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:4362514..4363878
Molecular Weight (calculated)
47732.7 Da
IEP (calculated)
6.661
GRAVY (calculated)
0.192
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLSGMRQH LMCPISLQPM QDPVTAPTGI TYDRRAIERW LAAGHATCPV TGQPLALADL TPNHTLRRLI QSWRLPSSTS TPPAPDAGEA KLLADDVVEQ
101: QQRPPEVAAA DVVVKKLLCT VACPSVDVLR EAAEVASESD VARRYMVDAG VLQRVLRVIV SSASEVIKST YPEHQVRRSL EATRTVEAGL DLVRALAVSG
201: DELRPLVVAD THVHNLLDAV TDVLVALEPV GTSGGDTDTA RESVVRLLDS VTEAASSAVL ERLRPELFRA VTAVVRDRVS PGAMRCALRV LLHACPLGRN
301: RALVVDAGAA HEAIELELDA PPPSSSPASA GGGGRRVTEL AMALLAELCA CADGRAAVAA HPAGVAVVAR RLLRVSAAAD ACAVRVLAAV GGRAASPEVL
401: REMARVGAVG KLCCVLQADC DAAVKEAARA VLRLHSGVWS GSPCVSAYLL SRYL
101: QQRPPEVAAA DVVVKKLLCT VACPSVDVLR EAAEVASESD VARRYMVDAG VLQRVLRVIV SSASEVIKST YPEHQVRRSL EATRTVEAGL DLVRALAVSG
201: DELRPLVVAD THVHNLLDAV TDVLVALEPV GTSGGDTDTA RESVVRLLDS VTEAASSAVL ERLRPELFRA VTAVVRDRVS PGAMRCALRV LLHACPLGRN
301: RALVVDAGAA HEAIELELDA PPPSSSPASA GGGGRRVTEL AMALLAELCA CADGRAAVAA HPAGVAVVAR RLLRVSAAAD ACAVRVLAAV GGRAASPEVL
401: REMARVGAVG KLCCVLQADC DAAVKEAARA VLRLHSGVWS GSPCVSAYLL SRYL
001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
Arabidopsis Description
PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.