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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH23958
KRH39841
KRH44640
KRH47011

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35930.1 KRH23958 AT4G25200.1 21798944
AT2G35930.1 KRH39841 AT4G25200.1 21798944
AT3G52450.1 KRH44640 AT5G49830.2 23170036
AT3G52450.1 KRH47011 AT5G49830.2 23170036
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG96257 Soybean cytosol 96.18 96.18
KRG96268 Soybean cytosol 96.18 96.18
KRH68014 Soybean cytosol 94.75 94.52
KRH32856 Soybean cytosol 70.17 70.0
KRH72176 Soybean cytosol 69.69 69.86
PGSC0003DMT400055050 Potato cytosol 62.29 66.58
Solyc01g007020.2.1 Tomato cytosol 64.2 65.93
PGSC0003DMT400055045 Potato cytosol 33.17 65.88
PGSC0003DMT400054949 Potato cytosol 63.72 65.76
PGSC0003DMT400055049 Potato cytosol, nucleus, plasma membrane 63.72 65.76
PGSC0003DMT400055051 Potato cytosol 61.81 65.74
VIT_08s0105g00190.t01 Wine grape cytosol, plastid, vacuole 64.2 65.45
Solyc01g007030.2.1 Tomato cytosol 32.94 65.4
VIT_08s0105g00180.t01 Wine grape cytosol, plastid, vacuole 63.96 65.21
Solyc01g007000.2.1 Tomato cytosol, nucleus, vacuole 63.48 65.04
Solyc01g007010.2.1 Tomato cytosol 62.05 63.73
PGSC0003DMT400054947 Potato cytosol 45.58 63.24
PGSC0003DMT400054948 Potato cytosol 42.72 62.81
Solyc01g007040.2.1 Tomato cytosol, nucleus, vacuole 26.25 61.45
CDX78096 Canola cytosol 55.85 60.15
CDY59599 Canola cytosol 58.23 59.66
CDX95337 Canola cytosol 57.76 59.17
CDY23218 Canola cytosol 55.13 58.33
CDX79645 Canola cytosol 56.32 57.84
CDX75084 Canola cytosol 55.85 57.64
CDY32070 Canola cytosol 56.56 57.52
AT2G35930.1 Thale cress cytosol 56.32 57.42
CDX84168 Canola cytosol 55.61 57.39
Bra017278.1-P Field mustard cytosol 56.32 57.28
CDY40422 Canola cytosol 56.32 57.28
Bra005309.1-P Field mustard cytosol 52.74 57.11
KRH22633 Soybean cytosol, nucleus 54.89 57.07
Bra023044.1-P Field mustard cytosol 55.61 56.97
Bra012803.1-P Field mustard cytosol 57.28 56.74
CDX84587 Canola cytosol 55.37 56.72
KRH26691 Soybean cytosol 52.03 56.33
AT3G52450.1 Thale cress cytosol 58.47 56.32
Bra006925.1-P Field mustard cytosol 58.47 56.32
KRH25324 Soybean cytosol 48.69 56.2
Bra033430.1-P Field mustard cytosol 55.85 55.19
GSMUA_Achr11P... Banana cytosol 48.93 54.96
GSMUA_Achr7P03220_001 Banana cytosol 40.57 54.84
HORVU2Hr1G123130.1 Barley cytosol 5.73 52.17
GSMUA_Achr8P30400_001 Banana cytosol 45.58 52.04
GSMUA_Achr10P... Banana cytosol 45.11 51.78
GSMUA_Achr5P01000_001 Banana cytosol 42.24 49.86
KRH72180 Soybean cytosol 25.54 46.12
Os04t0686000-01 Rice cytosol 45.11 45.76
OQU85086 Sorghum cytosol 46.06 45.2
TraesCS6D01G367600.1 Wheat cytosol 45.58 45.15
TraesCS6B01G421400.1 Wheat cytosol 45.11 45.0
EES06927 Sorghum cytosol 45.35 44.81
TraesCS6B01G420600.1 Wheat cytosol 44.87 44.76
TraesCS6B01G421900.1 Wheat cytosol 44.87 44.76
TraesCS6A01G382300.1 Wheat cytosol 44.63 44.31
Os02t0539200-01 Rice cytosol 46.54 44.12
KRH22634 Soybean cytosol 44.15 43.84
TraesCS6A01G382800.1 Wheat cytosol 44.15 43.84
TraesCS6D01G367100.1 Wheat cytosol 43.91 43.81
KRH26690 Soybean cytosol 44.39 43.56
Os01t0865700-00 Rice plastid 41.77 43.0
TraesCS3A01G376900.1 Wheat cytosol 42.72 42.82
TraesCS3D01G370000.1 Wheat cytosol 42.72 42.82
KRH25323 Soybean cytosol 41.29 42.82
EES13136 Sorghum cytosol 43.44 42.72
TraesCS3B01G409400.1 Wheat cytosol 42.48 42.69
KRH68013 Soybean cytosol 30.07 42.57
HORVU3Hr1G083500.1 Barley cytosol 41.77 42.37
Zm00001d016730_P001 Maize cytosol 43.91 42.2
KRG88869 Soybean cytosol 41.77 41.97
HORVU6Hr1G089560.1 Barley plastid 44.87 41.69
EES03937 Sorghum plastid 40.57 41.67
HORVU6Hr1G089590.1 Barley plastid 44.87 41.59
Zm00001d001769_P001 Maize cytosol, endoplasmic reticulum, peroxisome 38.9 41.58
HORVU0Hr1G003810.1 Barley cytosol 42.72 41.53
TraesCS2A01G298000.1 Wheat cytosol 42.72 41.53
TraesCS2D01G296100.1 Wheat cytosol 42.72 41.53
TraesCS2B01G314500.1 Wheat cytosol 42.48 41.3
Zm00001d042738_P001 Maize cytosol 40.1 41.18
Zm00001d003745_P001 Maize nucleus 43.44 40.62
KXG26241 Sorghum cytosol 43.44 39.39
TraesCSU01G036400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.61 33.96
TraesCS2B01G601300.1 Wheat cytosol 34.37 33.72
TraesCS2D01G594700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.13 33.49
KRH72959 Soybean cytosol, mitochondrion 34.37 32.88
KRH30918 Soybean mitochondrion 33.17 31.95
KRH17309 Soybean cytosol, mitochondrion 33.41 31.89
KRH50316 Soybean cytosol, plasma membrane, plastid 31.26 31.64
KRH70657 Soybean cytosol 31.26 31.57
KRH39018 Soybean mitochondrion 32.94 31.51
TraesCS6B01G209000.1 Wheat cytosol 31.74 31.44
KRH48691 Soybean cytosol 32.7 31.35
HORVU2Hr1G123050.1 Barley cytosol 24.82 30.95
HORVU6Hr1G034250.1 Barley cytosol, nucleus, peroxisome 31.98 30.95
KRG97963 Soybean mitochondrion 31.74 30.86
TraesCS6A01G176800.1 Wheat cytosol 31.26 30.32
TraesCS6D01G167300.1 Wheat cytosol 31.26 30.25
GSMUA_Achr9P29630_001 Banana cytosol 42.96 29.13
KXG23010 Sorghum cytosol 30.79 28.41
Os12t0161100-00 Rice cytosol 29.12 27.79
KRH53869 Soybean cytosol 26.97 27.1
KRH55660 Soybean cytosol 7.88 26.4
KRH43397 Soybean cytosol 26.25 26.32
KRH59546 Soybean cytosol 25.78 25.84
KRH61438 Soybean cytosol 25.06 24.88
KRH52124 Soybean cytosol 24.82 24.47
KRH36899 Soybean cytosol 21.48 24.26
KRH08734 Soybean mitochondrion 23.87 24.15
KRH70331 Soybean mitochondrion 23.39 24.08
KRH40934 Soybean cytosol 22.2 23.97
KRH05554 Soybean cytosol 23.87 23.87
KRH59579 Soybean cytosol 21.24 23.8
KRH77156 Soybean cytosol 25.3 23.61
KRG88755 Soybean cytosol 23.87 23.26
KRH53906 Soybean cytosol 21.48 22.84
KRH58142 Soybean cytosol 23.87 22.52
KRH64033 Soybean cytosol 21.0 22.39
Zm00001d023480_P001 Maize cytosol 29.83 22.36
KRH28330 Soybean plastid 25.78 21.01
Protein Annotations
Gene3D:1.25.10.10Gene3D:3.30.40.10MapMan:35.1EMBL:ACUP02006701InterPro:ARM-likeInterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_10G262600GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538
UniProt:I1LEJ9InterPro:IPR003613InterPro:IPR011989InterPro:IPR013083EnsemblPlants:KRH35744ProteinID:KRH35744
ProteinID:KRH35744.1PFAM:PF04564PFscan:PS51698PANTHER:PTHR22849PANTHER:PTHR22849:SF54SMART:SM00504
SUPFAM:SSF48371SUPFAM:SSF57850UniParc:UPI00023CD639InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHDSEG:seg
Description
hypothetical protein
Coordinates
chr10:-:48731315..48732574
Molecular Weight (calculated)
46729.8 Da
IEP (calculated)
8.484
GRAVY (calculated)
-0.091
Length
419 amino acids
Sequence
(BLAST)
001: MNEIDVPSFF LCPISLEIMK DPVTVSTGIT YDRESIETWL FSKKNTTCPI TKQPLIDYTD LTPNHTLRRL IQSWCTMNAS HGIERIPTPK PPVNKNQISK
101: LLKDASHSPL TCLRRLKSIA SGSETNKRCM EASGAVEFLA SIVINNNSNI DSSNEADSND GSGFELKTSA SDEALSLLHN LHLSEQGLKT LLSFRNGEFI
201: ESLTRVMQKG FFESRAYAVF LLKSTSEVAE PVQLLHLRQE LFVELVQVLK DQISQKTSKA TLQTLIQFSP WGRNRIKAVE ADTVPVLVEL LLDCKERKPC
301: EMMLVLLELL CQCAEGRAEL LSHAAGLAIV SKKILRVSTL ANDRAVKIIL SLSRFSATPH VVQEMLKLGV VAKLCLVLQV DSGNKAKEKA REILKLHARA
401: WRNSPCIPNN LLNSYTNYV
Best Arabidopsis Sequence Match ( AT3G52450.1 )
(BLAST)
001: MDQEIEIPSF FLCPISLDIM KDPVIVSTGI TYDRESIEKW LFSGKKNSCP VTKQVITETD LTPNHTLRRL IQSWCTLNAS YGIERIPTPK PPICKSEIEK
101: LIKESSSSHL NQVKCLKRLR QIVSENTTNK RCLEAAEVPE FLANIVSNSV DTYNSPSSSL SSSNLNDMCQ SNMLENRFDS SRSLMDEALS VLYHLDTSET
201: ALKSLLNNKK GTNLVKTLTK IMQRGIYESR AYAALLLKKL LEVADPMQII LLERELFGEV IQILHDQISH KATRSAMQIL VITCPWGRNR HKAVEGGTIS
301: MIIELLMDDT FSSERRNSEM AMVVLDMLCQ CAEGRAEFLN HGAAIAVVSK KILRVSQITS ERAVRVLLSV GRFCATPSLL QEMLQLGVVA KLCLVLQVSC
401: GNKTKEKAKE LLKLHARVWR ESPCVPRNLY DSYPA
Arabidopsis Description
PUB22RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VML4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.