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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH23958
KRH39841
KRH44640
KRH47011

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35930.1 KRH23958 AT4G25200.1 21798944
AT2G35930.1 KRH39841 AT4G25200.1 21798944
AT3G52450.1 KRH44640 AT5G49830.2 23170036
AT3G52450.1 KRH47011 AT5G49830.2 23170036
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH72176 Soybean cytosol 91.67 92.11
KRH35744 Soybean cytosol 70.0 70.17
KRH68014 Soybean cytosol 69.76 69.76
KRG96257 Soybean cytosol 69.52 69.69
KRG96268 Soybean cytosol 69.29 69.45
PGSC0003DMT400055045 Potato cytosol 31.9 63.51
VIT_08s0105g00190.t01 Wine grape cytosol, plastid, vacuole 61.43 62.77
Solyc01g007030.2.1 Tomato cytosol 31.43 62.56
VIT_08s0105g00180.t01 Wine grape cytosol, plastid, vacuole 61.19 62.53
PGSC0003DMT400054949 Potato cytosol 58.81 60.84
PGSC0003DMT400055051 Potato cytosol 56.9 60.66
Solyc01g007020.2.1 Tomato cytosol 58.81 60.54
PGSC0003DMT400055050 Potato cytosol 56.43 60.46
PGSC0003DMT400055049 Potato cytosol, nucleus, plasma membrane 58.1 60.1
Solyc01g007000.2.1 Tomato cytosol, nucleus, vacuole 58.33 59.9
Solyc01g007010.2.1 Tomato cytosol 57.62 59.31
HORVU2Hr1G123130.1 Barley cytosol 6.43 58.7
PGSC0003DMT400054948 Potato cytosol 39.52 58.25
CDX78096 Canola cytosol 53.57 57.84
Solyc01g007040.2.1 Tomato cytosol, nucleus, vacuole 24.52 57.54
CDX75084 Canola cytosol 55.48 57.39
CDX84168 Canola cytosol 55.48 57.39
CDY59599 Canola cytosol 55.71 57.21
Bra005309.1-P Field mustard cytosol 52.62 57.11
CDX95337 Canola cytosol 55.48 56.97
CDX79645 Canola cytosol 55.24 56.86
CDY23218 Canola cytosol 53.57 56.82
PGSC0003DMT400054947 Potato cytosol 40.71 56.62
KRH22633 Soybean cytosol, nucleus 54.05 56.33
AT2G35930.1 Thale cress cytosol 55.0 56.2
GSMUA_Achr7P03220_001 Banana cytosol 41.43 56.13
Bra023044.1-P Field mustard cytosol 54.05 55.5
CDX84587 Canola cytosol 54.05 55.5
Bra017278.1-P Field mustard cytosol 54.05 55.1
CDY32070 Canola cytosol 54.05 55.1
CDY40422 Canola cytosol 54.05 55.1
Bra012803.1-P Field mustard cytosol 55.0 54.61
KRH26691 Soybean cytosol 50.24 54.52
Bra033430.1-P Field mustard cytosol 55.0 54.48
KRH25324 Soybean cytosol 46.9 54.27
Bra006925.1-P Field mustard cytosol 55.95 54.02
GSMUA_Achr11P... Banana cytosol 47.38 53.35
AT3G52450.1 Thale cress cytosol 54.29 52.41
GSMUA_Achr10P... Banana cytosol 45.0 51.78
GSMUA_Achr8P30400_001 Banana cytosol 45.0 51.5
GSMUA_Achr5P01000_001 Banana cytosol 42.14 49.86
Os04t0686000-01 Rice cytosol 45.0 45.76
OQU85086 Sorghum cytosol 45.95 45.2
EES06927 Sorghum cytosol 45.24 44.81
TraesCS6B01G420600.1 Wheat cytosol 44.76 44.76
TraesCS6B01G421400.1 Wheat cytosol 44.76 44.76
Os01t0865700-00 Rice plastid 43.33 44.72
TraesCS6D01G367600.1 Wheat cytosol 45.0 44.68
TraesCS6D01G367100.1 Wheat cytosol 44.52 44.52
TraesCS6B01G421900.1 Wheat cytosol 44.29 44.29
TraesCS3D01G370000.1 Wheat cytosol 43.81 44.02
KRH26690 Soybean cytosol 44.52 43.79
EES13136 Sorghum cytosol 44.29 43.66
TraesCS3B01G409400.1 Wheat cytosol 43.33 43.65
KRH22634 Soybean cytosol 43.81 43.6
TraesCS6A01G382300.1 Wheat cytosol 43.81 43.6
HORVU3Hr1G083500.1 Barley cytosol 42.86 43.58
TraesCS6A01G382800.1 Wheat cytosol 43.57 43.36
TraesCS3A01G376900.1 Wheat cytosol 43.1 43.3
Os02t0539200-01 Rice cytosol 45.48 43.21
EES03937 Sorghum plastid 41.43 42.65
Zm00001d016730_P001 Maize cytosol 43.81 42.2
HORVU6Hr1G089560.1 Barley plastid 45.24 42.13
Zm00001d001769_P001 Maize cytosol, endoplasmic reticulum, peroxisome 39.29 42.09
HORVU6Hr1G089590.1 Barley plastid 45.24 42.04
Zm00001d042738_P001 Maize cytosol 40.71 41.91
KRH25323 Soybean cytosol 40.24 41.83
KRH72180 Soybean cytosol 23.1 41.81
HORVU0Hr1G003810.1 Barley cytosol 42.14 41.07
KRG88869 Soybean cytosol 40.71 41.01
Zm00001d003745_P001 Maize nucleus 43.57 40.85
TraesCS2A01G298000.1 Wheat cytosol 41.9 40.84
TraesCS2D01G296100.1 Wheat cytosol 41.67 40.6
TraesCS2B01G314500.1 Wheat cytosol 41.43 40.37
KRH68013 Soybean cytosol 28.1 39.86
KXG26241 Sorghum cytosol 42.86 38.96
TraesCS2B01G601300.1 Wheat cytosol 36.67 36.07
TraesCS2D01G594700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 36.19 35.6
TraesCSU01G036400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 36.19 35.6
KRH50316 Soybean cytosol, plasma membrane, plastid 33.1 33.57
KRH70657 Soybean cytosol 32.62 33.01
TraesCS6B01G209000.1 Wheat cytosol 33.1 32.86
HORVU2Hr1G123050.1 Barley cytosol 25.95 32.44
TraesCS6D01G167300.1 Wheat cytosol 32.86 31.87
TraesCS6A01G176800.1 Wheat cytosol 32.62 31.71
KRH72959 Soybean cytosol, mitochondrion 32.86 31.51
HORVU6Hr1G034250.1 Barley cytosol, nucleus, peroxisome 32.14 31.18
KRH39018 Soybean mitochondrion 32.38 31.05
KRH30918 Soybean mitochondrion 31.9 30.8
KRH17309 Soybean cytosol, mitochondrion 31.9 30.52
KRH48691 Soybean cytosol 31.67 30.43
KRG97963 Soybean mitochondrion 30.95 30.16
KXG23010 Sorghum cytosol 32.38 29.96
GSMUA_Achr9P29630_001 Banana cytosol 43.57 29.61
Os12t0161100-00 Rice cytosol 29.29 28.02
KRH53869 Soybean cytosol 26.9 27.1
KRH40934 Soybean cytosol 24.76 26.8
KRH43397 Soybean cytosol 26.43 26.55
KRH59546 Soybean cytosol 26.43 26.55
KRH55660 Soybean cytosol 7.86 26.4
KRH59579 Soybean cytosol 23.33 26.2
KRH52124 Soybean cytosol 26.43 26.12
KRH61438 Soybean cytosol 26.19 26.07
KRH53906 Soybean cytosol 23.81 25.38
KRH05554 Soybean cytosol 25.0 25.06
KRH58142 Soybean cytosol 26.19 24.77
KRH77156 Soybean cytosol 26.43 24.72
KRH64033 Soybean cytosol 22.86 24.43
KRG88755 Soybean cytosol 25.0 24.42
KRH36899 Soybean cytosol 21.19 23.99
KRH08734 Soybean mitochondrion 23.57 23.91
KRH70331 Soybean mitochondrion 23.1 23.83
Zm00001d023480_P001 Maize cytosol 29.76 22.36
KRH28330 Soybean plastid 26.9 21.98
Protein Annotations
Gene3D:1.25.10.10EntrezGene:100785598Gene3D:3.30.40.10MapMan:35.1EMBL:ACUP02006187InterPro:ARM-like
InterPro:ARM-type_foldEnsemblPlantsGene:GLYMA_10G081900GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740
GO:GO:0019538UniProt:I1L9K7InterPro:IPR003613InterPro:IPR011989InterPro:IPR013083EnsemblPlants:KRH32856
ProteinID:KRH32856ProteinID:KRH32856.1PFAM:PF04564PFscan:PS51698PANTHER:PTHR22849PANTHER:PTHR22849:SF54
SMART:SM00504SUPFAM:SSF48371SUPFAM:SSF57850UniParc:UPI000233D267InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:9891610..9892911
Molecular Weight (calculated)
46074.7 Da
IEP (calculated)
8.705
GRAVY (calculated)
0.155
Length
420 amino acids
Sequence
(BLAST)
001: MDEIDVPPFF VCPISLELMK DPVTVSTGIT YDRHSIEKWL FAAVPKNNTC PVTKQPLLPD LTPNHTLRRL IQAWCTVNAS HGVQRIPTPK PPVDKTLIEK
101: LLRDASASDS PSLQLRSLRT LKSIASESQS NKRCIESAKD AVSFLASFIT TTVTVTTTTV LLDDVELEIK TSIAHEALSL LHSIQLSESG LKALMNHPEF
201: INSLTKIMQS GIYESRAYAV FLLNSLSEVA DPALLVNLKI DLFTELVQVL KDQVSEKASK ATLRALIQVC PWGRNRVKAV EAGAVPVLVE LLLECKERKP
301: IEMMLVLLEI LCQSADGRAG LLAHAAGVAI VAKKILRVST MANDRAAKIL LSVCRFSATH GVVQEMLQLG VVAKMCLVLQ VDSGNKAKEK AREILKLHAR
401: AWRNSPCIPH NLLASFPMSS
Best Arabidopsis Sequence Match ( AT2G35930.1 )
(BLAST)
001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
Arabidopsis Description
PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.