Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G09800.1 | KRG89234 | AT4G33945.1 | 21798944 |
| AT5G09800.1 | KRH49769 | AT4G33945.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53869 | Soybean | cytosol | 72.78 | 64.75 |
| KRH43397 | Soybean | cytosol | 55.26 | 49.04 |
| KRH59546 | Soybean | cytosol | 54.72 | 48.56 |
| VIT_04s0044g00870.t01 | Wine grape | cytosol | 48.52 | 43.69 |
| CDY08864 | Canola | cytosol | 47.71 | 42.24 |
| Bra024318.1-P | Field mustard | cytosol | 47.44 | 42.0 |
| CDX84538 | Canola | cytosol | 47.44 | 42.0 |
| AT5G64660.1 | Thale cress | cytosol | 46.63 | 41.19 |
| AT5G09800.1 | Thale cress | cytosol | 44.47 | 40.34 |
| AT3G18710.1 | Thale cress | cytosol | 43.67 | 39.04 |
| Bra001717.1-P | Field mustard | cytosol | 43.4 | 37.97 |
| CDX75980 | Canola | cytosol | 43.4 | 37.97 |
| CDX82332 | Canola | cytosol | 42.86 | 37.5 |
| CDY71041 | Canola | cytosol | 41.24 | 37.05 |
| PGSC0003DMT400065698 | Potato | cytosol | 41.78 | 36.9 |
| Solyc11g005700.1.1 | Tomato | cytosol | 41.78 | 36.9 |
| GSMUA_Achr8P30420_001 | Banana | mitochondrion | 26.95 | 36.63 |
| Bra037568.1-P | Field mustard | cytosol | 40.7 | 36.56 |
| CDX92262 | Canola | cytosol | 40.16 | 36.08 |
| Bra022347.1-P | Field mustard | cytosol | 40.97 | 35.85 |
| CDX99325 | Canola | cytosol | 40.43 | 35.46 |
| GSMUA_Achr10P... | Banana | plastid | 32.34 | 31.25 |
| GSMUA_Achr6P18140_001 | Banana | cytosol | 33.96 | 30.81 |
| TraesCS2D01G296700.1 | Wheat | cytosol, mitochondrion, plastid | 35.31 | 29.71 |
| TraesCS2B01G315100.1 | Wheat | cytosol | 35.31 | 29.71 |
| TraesCS2A01G298600.1 | Wheat | cytosol, mitochondrion, plastid | 35.31 | 29.71 |
| KRH08734 | Soybean | mitochondrion | 32.88 | 29.47 |
| Zm00001d016719_P001 | Maize | cytosol | 33.15 | 28.67 |
| Zm00001d050689_P001 | Maize | cytosol | 33.15 | 28.67 |
| EES05205 | Sorghum | cytosol | 34.5 | 28.26 |
| OQU81548 | Sorghum | mitochondrion | 33.96 | 28.19 |
| GSMUA_Achr5P01020_001 | Banana | cytosol | 30.46 | 28.18 |
| Zm00001d025379_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 33.69 | 28.15 |
| KRH70331 | Soybean | mitochondrion | 30.73 | 28.01 |
| Os04t0418500-01 | Rice | plastid | 33.42 | 27.49 |
| KRH55660 | Soybean | cytosol | 8.63 | 25.6 |
| Os02t0540700-00 | Rice | plastid | 34.23 | 25.15 |
| HORVU2Hr1G074130.1 | Barley | plastid | 34.77 | 24.9 |
| KRH72180 | Soybean | cytosol | 15.09 | 24.14 |
| KRH22633 | Soybean | cytosol, nucleus | 25.61 | 23.57 |
| KRH26691 | Soybean | cytosol | 24.26 | 23.26 |
| KRH40934 | Soybean | cytosol | 24.26 | 23.2 |
| KRH59579 | Soybean | cytosol | 23.18 | 22.99 |
| Zm00001d038280_P001 | Maize | cytosol | 26.95 | 22.12 |
| Os05t0439400-01 | Rice | plasma membrane | 26.68 | 21.9 |
| KXG22102 | Sorghum | mitochondrion | 26.95 | 21.88 |
| TraesCS1A01G274800.1 | Wheat | mitochondrion | 26.68 | 21.85 |
| KRH68014 | Soybean | cytosol | 24.53 | 21.67 |
| HORVU1Hr1G074180.1 | Barley | mitochondrion, plastid | 26.42 | 21.63 |
| TraesCS1B01G284200.1 | Wheat | mitochondrion | 26.42 | 21.63 |
| KRH72176 | Soybean | cytosol | 24.26 | 21.53 |
| KRH50316 | Soybean | cytosol, plasma membrane, plastid | 23.99 | 21.5 |
| KRH35744 | Soybean | cytosol | 24.26 | 21.48 |
| TraesCS1D01G274600.1 | Wheat | mitochondrion | 26.15 | 21.41 |
| KRG96257 | Soybean | cytosol | 23.99 | 21.24 |
| KRG96268 | Soybean | cytosol | 23.99 | 21.24 |
| KRH32856 | Soybean | cytosol | 23.99 | 21.19 |
| KRH58142 | Soybean | cytosol | 25.07 | 20.95 |
| KRH39018 | Soybean | mitochondrion | 24.53 | 20.78 |
| KRH70657 | Soybean | cytosol | 23.18 | 20.72 |
| KRG97963 | Soybean | mitochondrion | 23.99 | 20.65 |
| KRH48691 | Soybean | cytosol | 24.26 | 20.59 |
| KRG88755 | Soybean | cytosol | 23.72 | 20.47 |
| KRH05554 | Soybean | cytosol | 22.91 | 20.29 |
| KRH30918 | Soybean | mitochondrion | 23.72 | 20.23 |
| KRH61438 | Soybean | cytosol | 22.91 | 20.14 |
| KRH64033 | Soybean | cytosol | 21.29 | 20.1 |
| KRH53906 | Soybean | cytosol | 21.29 | 20.05 |
| KRH68013 | Soybean | cytosol | 15.9 | 19.93 |
| KRG88869 | Soybean | cytosol | 22.37 | 19.9 |
| KRH25324 | Soybean | cytosol | 19.41 | 19.83 |
| KRH52124 | Soybean | cytosol | 22.37 | 19.53 |
| KRH72959 | Soybean | cytosol, mitochondrion | 22.91 | 19.41 |
| KRH77156 | Soybean | cytosol | 23.45 | 19.38 |
| KRH17309 | Soybean | cytosol, mitochondrion | 22.91 | 19.36 |
| KRH22634 | Soybean | cytosol | 21.83 | 19.19 |
| KRH25323 | Soybean | cytosol | 20.49 | 18.81 |
| KRH26690 | Soybean | cytosol | 21.29 | 18.5 |
| KRH28330 | Soybean | plastid | 23.99 | 17.32 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02005400 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlantsGene:GLYMA_09G030600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | UniProt:K7LBJ3 | EnsemblPlants:KRH36899 | ProteinID:KRH36899 |
| ProteinID:KRH36899.1 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF20 | SMART:SM00504 |
| SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniParc:UPI000296D805 | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:2520360..2525908
Molecular Weight (calculated)
41131.6 Da
IEP (calculated)
9.457
GRAVY (calculated)
0.146
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRDKQDLCI SVPSFFKCPI SLDIMKSPVN LCTELTYNRF NIQRWLDDGN NTCPATMQLL PTKHFIPNCT LQNLIQICSD SLRRQTAFEP LISCDQVISI
101: VTNLKTNSDF LRFASLAKLL NFAKDSHQNK SFLAKIEGFV DQLVRFLDNV DGRVTAGTSV KFLERVVIVL GSPDSKIASA RVLQFIVVDA DTKISIAEKQ
201: GVVAELLKSA SSEKDLALIE AALTSLMAIS VPKRNKLKLV NLRAVKAMKR LMGVLEIVET ALSTRKGRRE ICEDATECVA AVLSKVLKVS RGVTEHAVQE
301: AVTQNNGLTK ILLLMQSNCA PHVQQMCTDL LKIFRVNSKS CLSFFLSFFQ PSCTVRLLNA KVINKNGTIF G
101: VTNLKTNSDF LRFASLAKLL NFAKDSHQNK SFLAKIEGFV DQLVRFLDNV DGRVTAGTSV KFLERVVIVL GSPDSKIASA RVLQFIVVDA DTKISIAEKQ
201: GVVAELLKSA SSEKDLALIE AALTSLMAIS VPKRNKLKLV NLRAVKAMKR LMGVLEIVET ALSTRKGRRE ICEDATECVA AVLSKVLKVS RGVTEHAVQE
301: AVTQNNGLTK ILLLMQSNCA PHVQQMCTDL LKIFRVNSKS CLSFFLSFFQ PSCTVRLLNA KVINKNGTIF G
001: MRKDDLCITV PTFFRCPISL DVMKSPVSLC TGVTYDRASI QRWLDGGNNT CPATMQILQN KDFIPNRTLQ RLIEIWSDSV RRRTCVESAE LAAPTRDEIA
101: DAIDRVKIEK EERDDREVLS KIVRFGRESD DNRGFLAGKD DFVKLLVDLI NQVDFETTSA AKSLVVQEAV KILSTIRSKV SDRRRFSNLI LTNGRDRLSV
201: IVYLFKTGNV ELKIDCAGLL EFIAVDAESK LLIAERDGLI TELMKSISKD SDLSLIESSL SCLIAISSPK RVKLNLLREK LIGDVTKLLS DSTSSLSVSV
301: TEKCLKLLEI LASTKEGRSE ICGGDGECLK TVVKKLMKVS TAATEHAVTV LWSVSYLFKE DKALEAVTSV NGVTKILLLL QSNCSPAVRR MLTDLLKVFK
401: VNSRSCLSAY DTKTTHIMPF
101: DAIDRVKIEK EERDDREVLS KIVRFGRESD DNRGFLAGKD DFVKLLVDLI NQVDFETTSA AKSLVVQEAV KILSTIRSKV SDRRRFSNLI LTNGRDRLSV
201: IVYLFKTGNV ELKIDCAGLL EFIAVDAESK LLIAERDGLI TELMKSISKD SDLSLIESSL SCLIAISSPK RVKLNLLREK LIGDVTKLLS DSTSSLSVSV
301: TEKCLKLLEI LASTKEGRSE ICGGDGECLK TVVKKLMKVS TAATEHAVTV LWSVSYLFKE DKALEAVTSV NGVTKILLLL QSNCSPAVRR MLTDLLKVFK
401: VNSRSCLSAY DTKTTHIMPF
Arabidopsis Description
PUB27U-box domain-containing protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.