CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
extracellular 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08734	Soybean	mitochondrion	88.7	87.2
PGSC0003DMT400002079	Potato	cytosol	42.75	41.63
GSMUA_Achr8P30420_001	Banana	mitochondrion	27.76	41.39
VIT_18s0166g00190.t01	Wine grape	plasma membrane	39.8	40.5
Solyc04g071030.1.1	Tomato	cytosol	42.01	40.05
KRH43397	Soybean	cytosol	38.57	37.56
KRH59546	Soybean	cytosol	37.59	36.6
KRH53869	Soybean	cytosol	36.85	35.97
GSMUA_Achr5P01020_001	Banana	cytosol	33.66	34.16
GSMUA_Achr6P18140_001	Banana	cytosol	33.17	33.01
GSMUA_Achr10P...	Banana	plastid	30.71	32.55
Zm00001d050689_P001	Maize	cytosol	34.15	32.4
Zm00001d016719_P001	Maize	cytosol	34.15	32.4
Os04t0418500-01	Rice	plastid	34.89	31.49
EES05205	Sorghum	cytosol	34.64	31.13
OQU81548	Sorghum	mitochondrion	33.91	30.87
KRH36899	Soybean	cytosol	28.01	30.73
Zm00001d025379_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	32.92	30.18
TraesCS2D01G296700.1	Wheat	cytosol, mitochondrion, plastid	32.68	30.16
TraesCS2A01G298600.1	Wheat	cytosol, mitochondrion, plastid	32.68	30.16
TraesCS2B01G315100.1	Wheat	cytosol	32.68	30.16
Os02t0540700-00	Rice	plastid	34.4	27.72
Zm00001d038280_P001	Maize	cytosol	30.71	27.65
Os05t0439400-01	Rice	plasma membrane	30.71	27.65
HORVU1Hr1G074180.1	Barley	mitochondrion, plastid	30.47	27.37
KXG22102	Sorghum	mitochondrion	30.71	27.35
TraesCS1B01G284200.1	Wheat	mitochondrion	30.22	27.15
TraesCS1A01G274800.1	Wheat	mitochondrion	30.22	27.15
TraesCS1D01G274600.1	Wheat	mitochondrion	30.22	27.15
HORVU2Hr1G074130.1	Barley	plastid	33.42	26.25
KRH55660	Soybean	cytosol	7.86	25.6
KRH68013	Soybean	cytosol	18.43	25.34
KRH26691	Soybean	cytosol	23.1	24.29
KRH72180	Soybean	cytosol	13.76	24.14
KRH22633	Soybean	cytosol, nucleus	23.83	24.07
KRG96257	Soybean	cytosol	24.57	23.87
KRH72176	Soybean	cytosol	24.32	23.68
KRG96268	Soybean	cytosol	24.32	23.63
KRH68014	Soybean	cytosol	24.32	23.57
KRH35744	Soybean	cytosol	24.08	23.39
KRH32856	Soybean	cytosol	23.83	23.1
KRH77156	Soybean	cytosol	25.06	22.72
KRH61438	Soybean	cytosol	22.85	22.04
KRH50316	Soybean	cytosol, plasma membrane, plastid	22.36	21.98
KRH58142	Soybean	cytosol	23.83	21.85
KRH59579	Soybean	cytosol	19.66	21.39
KRH48691	Soybean	cytosol	22.85	21.28
KRH05554	Soybean	cytosol	21.87	21.24
KRH70657	Soybean	cytosol	21.62	21.2
KRH40934	Soybean	cytosol	20.15	21.13
KRH39018	Soybean	mitochondrion	22.6	21.0
KRH52124	Soybean	cytosol	21.87	20.94
KRH25324	Soybean	cytosol	18.67	20.94
KRH22634	Soybean	cytosol	21.38	20.62
KRG88755	Soybean	cytosol	21.38	20.23
KRH72959	Soybean	cytosol, mitochondrion	21.62	20.09
KRH28330	Soybean	plastid	25.31	20.04
KRH26690	Soybean	cytosol	20.88	19.91
KRH17309	Soybean	cytosol, mitochondrion	21.13	19.59
KRH64033	Soybean	cytosol	18.67	19.34
KRH30918	Soybean	mitochondrion	20.15	18.85
KRH53906	Soybean	cytosol	18.18	18.78
KRG88869	Soybean	cytosol	19.16	18.7
KRH25323	Soybean	cytosol	18.43	18.56
KRG97963	Soybean	mitochondrion	19.66	18.56

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100811783	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	EMBL:ACUP02000767	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_02G083900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	UniProt:I1JDG3	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRH70331
ProteinID:KRH70331	ProteinID:KRH70331.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF106
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0002337490	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:7305741..7306964

Molecular Weight (calculated)

44251.3 Da

IEP (calculated)

8.282

GRAVY (calculated)

0.233

Length

407 amino acids

Sequence
(BLAST)

001: MAKVRDQKLY VTVPSLFRCP ISMDVMRSPV SLCTGVTYDR ASIQRWLDSG HDTCPATLQV LPSKDFIPNL TLHRLIRLWL LSSSAAEPFS PSSADHLRPL
101: LRKIHTSDDD LAGTLSIIAE FSLKSGEKRR SLATFPGFDS ALVRALAGSN SLIDAAENSI YLLDSVFREN GEKIRKLILD AREECFSSMV FVLRNGSMKS
201: KIETVRILEF LSCDFQSSKL VAETRGLLPL VASFLKDGVE ELNDAVLSLL GVVSVTHSAK MELVSSGIVE VVTKLLRACS AATAERCLRM LAILATCAEG
301: RAAMAVEPSL AAAVVERITK APKAAAADAV AVLWSLCCLC GNVKVRDDVA KRNGVVVVLL VMQRGWEEHV RSMCVDLIKV LKGPACKNGL GLELGCYDTK
401: TTHIKPC

Best Arabidopsis Sequence Match ( AT3G18710.1 )
(BLAST)

001: MGRDETETYI TVPSFFKCPI SLDVMRSPVS LCTGVTYDRA SIQRWLDGGN NTCPATMQLL KTKDFVPNLT LQRLINIWSD SIGRRHNGDS PVLNPPSGRE
101: VPTKEEVNVL LERLMSLENL MKIVRFVKDS DSNREFLSKK MEFVPMLVDI IRTKKTKIEL VIMAIRILDS IKVDRERLSN LMLANDGGDC LTAILLAIQR
201: GNLESKIESV RVLDWISFDA KSKLMIAERD GVLTEMMKSI SITESSDPSL IEASLSFLIT ISKSKRVRSK LIAAKAITKI KDILLTETLT NVAVTEKSLK
301: LLETLSSKRE GRLEICGDDN GRCVEGVVKK LLKVSTTATE HAVTILWCLC YVFREDKTVE ETVERSNGVT KLLVVIQSNC SAMVRQMAKD LIKVLKFNSS
401: ALAAYETKTT HIMPF

Arabidopsis Description

PUB29RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.