CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26690	Soybean	cytosol	92.89	91.8
KRH25323	Soybean	cytosol	68.25	71.29
KRG88869	Soybean	cytosol	68.96	69.78
VIT_06s0009g00370.t01	Wine grape	cytosol	58.53	60.99
PGSC0003DMT400038196	Potato	cytosol	50.95	51.44
Solyc01g009320.1.1	Tomato	cytosol	49.76	50.24
GSMUA_Achr11P...	Banana	cytosol	43.13	49.73
Solyc06g074140.1.1	Tomato	cytosol	48.82	49.05
Solyc11g068940.1.1	Tomato	cytosol	49.05	48.94
KRH72180	Soybean	cytosol	26.54	48.28
PGSC0003DMT400015179	Potato	cytosol	45.02	47.15
KRH68013	Soybean	cytosol	31.99	45.61
KRH68014	Soybean	cytosol	44.31	44.52
KRH22633	Soybean	cytosol, nucleus	42.42	44.42
KRG96257	Soybean	cytosol	44.08	44.39
KRH35744	Soybean	cytosol	43.84	44.15
KRG96268	Soybean	cytosol	43.84	44.15
KRH32856	Soybean	cytosol	43.6	43.81
KRH72176	Soybean	cytosol	42.42	42.82
KRH26691	Soybean	cytosol	38.86	42.38
KRH25324	Soybean	cytosol	33.89	39.39
KRH39018	Soybean	mitochondrion	29.62	28.54
KRH48691	Soybean	cytosol	28.67	27.69
KRG97963	Soybean	mitochondrion	27.96	27.38
KRH30918	Soybean	mitochondrion	27.96	27.13
KRH50316	Soybean	cytosol, plasma membrane, plastid	26.54	27.05
KRH70657	Soybean	cytosol	26.3	26.75
KRH53906	Soybean	cytosol	23.7	25.38
KRH64033	Soybean	cytosol	23.46	25.19
KRH72959	Soybean	cytosol, mitochondrion	25.83	24.89
KRH17309	Soybean	cytosol, mitochondrion	25.36	24.37
KRH40934	Soybean	cytosol	22.27	24.23
KRH55660	Soybean	cytosol	7.11	24.0
KRH53869	Soybean	cytosol	23.7	23.98
KRH59579	Soybean	cytosol	20.62	23.26
KRH52124	Soybean	cytosol	22.99	22.82
KRH61438	Soybean	cytosol	22.75	22.75
KRH58142	Soybean	cytosol	23.7	22.52
KRH77156	Soybean	cytosol	23.93	22.49
KRH43397	Soybean	cytosol	22.27	22.49
KRH05554	Soybean	cytosol	22.27	22.43
KRG88755	Soybean	cytosol	22.51	22.09
KRH36899	Soybean	cytosol	19.19	21.83
KRH59546	Soybean	cytosol	21.33	21.53
KRH08734	Soybean	mitochondrion	21.09	21.5
KRH70331	Soybean	mitochondrion	20.62	21.38
KRH28330	Soybean	plastid	24.17	19.84

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02008423	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_13G312800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
UniProt:I1M492	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRH22634	ProteinID:KRH22634
ProteinID:KRH22634.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF104	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000233C096	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:

Description

hypothetical protein

Coordinates

chr13:-:40797465..40799085

Molecular Weight (calculated)

47509.3 Da

IEP (calculated)

8.549

GRAVY (calculated)

-0.035

Length

422 amino acids

Sequence
(BLAST)

001: MLYESDIMTE IETPQFFLCP ISLQIMKDPV TTVTGITYDR ESIEQWLLKA KDCTCPITKQ RLPRSTEFLT PNHTLRRLIQ AWCSANEANG VDQIPTPKSP
101: LSIANVEKLV KDLEVSSRFQ RALEKLHDLA IENGRNRRCM ASAGVAEAMV HVITKSFIQG NKTTSCVEEA LRILGLLWSS ANNMVDNDNM KRMVGENFDF
201: LNSLTWVLQL QTKNNVKVIN EAMPILKLTI EAKDSTPLGN LKLEFFKVVV SVMKNRELTQ QAVKSALHVL IETCPLGRNR MKIVEAGAVV ELIELALEKP
301: EKNMTELIFI LLAHLCSCAD GREQFLQHAA GIAVVSKRIL RVSPTTDDRA LHIFSLVSKF SASNEVVQEM LRVGAVSKLC MVLQADCASY LKEKARGVLR
401: LHSKTWNNSP CIQVYLLTRF HR

Best Arabidopsis Sequence Match ( AT3G11840.1 )
(BLAST)

001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI

Arabidopsis Description

PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.