Factsheet for PGSC0003DMT400038196

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g009320.1.1	Tomato	cytosol	96.17	96.17
PGSC0003DMT400015179	Potato	cytosol	65.31	67.74
VIT_06s0009g00370.t01	Wine grape	cytosol	57.42	59.26
KRH25323	Soybean	cytosol	50.72	52.48
KRG88869	Soybean	cytosol	51.67	51.8
KRH26690	Soybean	cytosol	52.15	51.05
KRH22634	Soybean	cytosol	51.44	50.95
GSMUA_Achr11P...	Banana	cytosol	42.58	48.63
PGSC0003DMT400055045	Potato	cytosol	24.4	48.34
PGSC0003DMT400055049	Potato	cytosol, nucleus, plasma membrane	44.74	46.06
PGSC0003DMT400055050	Potato	cytosol	42.58	45.41
PGSC0003DMT400055051	Potato	cytosol	42.34	44.92
PGSC0003DMT400054949	Potato	cytosol	43.3	44.58
PGSC0003DMT400054946	Potato	cytosol	44.74	44.42
PGSC0003DMT400050493	Potato	cytosol	42.58	44.06
PGSC0003DMT400054948	Potato	cytosol	28.47	41.75
PGSC0003DMT400054947	Potato	cytosol	29.43	40.73
PGSC0003DMT400038197	Potato	cytosol	44.02	40.53
PGSC0003DMT400073836	Potato	cytosol	27.75	27.68
PGSC0003DMT400066588	Potato	cytosol	27.03	27.23
PGSC0003DMT400075778	Potato	mitochondrion	28.71	27.15
PGSC0003DMT400004594	Potato	cytosol	26.32	27.03
PGSC0003DMT400058621	Potato	cytosol, mitochondrion	28.47	26.39
PGSC0003DMT400012566	Potato	cytosol	23.68	22.05
PGSC0003DMT400002079	Potato	cytosol	21.77	21.77
PGSC0003DMT400060272	Potato	cytosol	20.57	21.29
PGSC0003DMT400065698	Potato	cytosol	20.81	20.71

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102589840	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	UniProt:M1B6G9	PFAM:PF04564	EnsemblPlantsGene:PGSC0003DMG400014732	PGSC:PGSC0003DMG400014732
EnsemblPlants:PGSC0003DMT400038196	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF104	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI000294F99A	InterPro:Ubox_domain	RefSeq:XP_006362629.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

Spotted leaf protein [Source:PGSC_GENE;Acc:PGSC0003DMG400014732]

Coordinates

chr1:-:6626489..6628263

Molecular Weight (calculated)

47343.5 Da

IEP (calculated)

8.369

GRAVY (calculated)

0.015

Length

418 amino acids

Sequence
(BLAST)

001: MDEVEIPQYF LCPISLMIMK DPVTTVTGIT YDRESIEMWL LTAEEEAMTT TCPVTKQILP RDIELLTPNH MLRRIIQAWC IANASKGIDR IPTPKYPLNK
101: SHILRLVRQV NNDKLCVEAL RKIDVLVIEN NEKNKKCLEE VGAIKAMVTF IVKSFKERKL INGLEEALRI FHLVWSSTIE NIQLVKENRD LIEAISWILR
201: SDMTKNQVVI KTQAMMVLKN VTEVLSSNLL SRLNPEFFQE LVNTLRKESE HHISQQATKG ALQVLINACP WGRNKHKIIE SGAIFELIEL ELGNAEKRVS
301: ELVLCVLAHL CTLADGRAEF LKHAGGLSVV AKRTLRVSSS TDDCAIQIFG SISRCSATKE VLMEMLRVGV VSKLCMVIQA SCGEYLKKKA MEILKTHSNV
401: WSNSPCIQVY LLTRYPGQ

Best Arabidopsis Sequence Match ( AT3G11840.1 )
(BLAST)

001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI

Arabidopsis Description

PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.