Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g006030.1.1 | Tomato | cytosol | 95.23 | 92.79 |
| KRG97963 | Soybean | mitochondrion | 48.21 | 46.87 |
| KRH30918 | Soybean | mitochondrion | 48.21 | 46.44 |
| PGSC0003DMT400058621 | Potato | cytosol, mitochondrion | 49.64 | 46.12 |
| PGSC0003DMT400075778 | Potato | mitochondrion | 47.97 | 45.48 |
| Bra039752.1-P | Field mustard | cytosol | 45.35 | 45.02 |
| KRH17309 | Soybean | cytosol, mitochondrion | 46.78 | 44.65 |
| CDY16432 | Canola | cytosol | 45.35 | 44.39 |
| AT5G37490.1 | Thale cress | cytosol, nucleus, peroxisome | 46.06 | 44.37 |
| CDY50319 | Canola | cytosol | 44.63 | 43.79 |
| KRH72959 | Soybean | cytosol, mitochondrion | 45.58 | 43.61 |
| AT1G66160.1 | Thale cress | cytosol | 44.15 | 42.92 |
| Bra025442.1-P | Field mustard | mitochondrion | 44.87 | 42.92 |
| CDX99694 | Canola | mitochondrion | 44.63 | 42.69 |
| CDY27655 | Canola | mitochondrion | 44.63 | 42.69 |
| GSMUA_Achr10P... | Banana | cytosol | 38.19 | 42.55 |
| GSMUA_Achr6P11310_001 | Banana | cytosol | 37.71 | 41.58 |
| GSMUA_Achr11P... | Banana | mitochondrion | 42.0 | 41.41 |
| GSMUA_Achr6P02470_001 | Banana | mitochondrion | 35.56 | 39.21 |
| GSMUA_Achr7P18640_001 | Banana | mitochondrion | 35.32 | 39.05 |
| TraesCS4B01G228700.1 | Wheat | mitochondrion | 40.57 | 38.64 |
| HORVU4Hr1G064070.1 | Barley | mitochondrion | 40.1 | 38.18 |
| TraesCS4D01G229900.1 | Wheat | mitochondrion | 40.1 | 38.18 |
| Os03t0240600-01 | Rice | plastid | 40.33 | 37.98 |
| Zm00001d028374_P001 | Maize | mitochondrion | 40.33 | 37.81 |
| CDY51529 | Canola | mitochondrion | 33.41 | 37.33 |
| EER92576 | Sorghum | mitochondrion | 40.33 | 37.22 |
| Bra040605.1-P | Field mustard | mitochondrion | 33.17 | 37.07 |
| TraesCS7B01G105600.1 | Wheat | mitochondrion | 39.14 | 36.77 |
| CDX92016 | Canola | mitochondrion | 32.22 | 36.68 |
| TraesCS7D01G201600.1 | Wheat | mitochondrion | 38.66 | 36.65 |
| TraesCS6B01G342800.1 | Wheat | mitochondrion | 39.62 | 36.56 |
| Zm00001d017976_P001 | Maize | mitochondrion | 39.14 | 36.28 |
| CDY28714 | Canola | mitochondrion | 32.46 | 36.27 |
| TraesCS6A01G312600.1 | Wheat | mitochondrion | 39.38 | 36.26 |
| CDX74232 | Canola | cytosol, extracellular, mitochondrion, plastid | 31.74 | 36.14 |
| TraesCS6D01G292200.1 | Wheat | mitochondrion | 39.14 | 36.12 |
| AT3G02840.1 | Thale cress | mitochondrion | 32.46 | 35.88 |
| Bra001067.1-P | Field mustard | mitochondrion | 31.5 | 35.87 |
| GSMUA_Achr3P02030_001 | Banana | plastid | 35.8 | 35.8 |
| Os02t0738200-01 | Rice | mitochondrion | 38.42 | 35.31 |
| EES05563 | Sorghum | mitochondrion | 38.66 | 35.06 |
| Zm00001d044734_P001 | Maize | mitochondrion | 36.52 | 34.62 |
| Os06t0248500-00 | Rice | mitochondrion | 36.99 | 34.22 |
| KXG19704 | Sorghum | mitochondrion | 37.47 | 34.2 |
| HORVU7Hr1G040790.2 | Barley | plastid | 38.9 | 33.4 |
| PGSC0003DMT400054949 | Potato | cytosol | 31.74 | 32.76 |
| PGSC0003DMT400055049 | Potato | cytosol, nucleus, plasma membrane | 31.74 | 32.76 |
| PGSC0003DMT400050493 | Potato | cytosol | 30.79 | 31.93 |
| PGSC0003DMT400055050 | Potato | cytosol | 29.83 | 31.89 |
| HORVU6Hr1G077120.1 | Barley | plastid | 38.9 | 31.84 |
| PGSC0003DMT400055051 | Potato | cytosol | 29.83 | 31.73 |
| PGSC0003DMT400055045 | Potato | cytosol | 15.75 | 31.28 |
| TraesCS5A01G088600.1 | Wheat | cytosol | 24.58 | 30.12 |
| Zm00001d030251_P001 | Maize | cytosol | 31.74 | 29.95 |
| PGSC0003DMT400054948 | Potato | cytosol | 20.05 | 29.47 |
| PGSC0003DMT400066588 | Potato | cytosol | 28.16 | 28.43 |
| PGSC0003DMT400038197 | Potato | cytosol | 30.07 | 27.75 |
| PGSC0003DMT400038196 | Potato | cytosol | 27.68 | 27.75 |
| PGSC0003DMT400054947 | Potato | cytosol | 19.57 | 27.15 |
| KXG38738 | Sorghum | plastid | 31.98 | 27.13 |
| PGSC0003DMT400004594 | Potato | cytosol | 25.06 | 25.8 |
| PGSC0003DMT400015179 | Potato | cytosol | 23.63 | 24.57 |
| PGSC0003DMT400054946 | Potato | cytosol | 23.87 | 23.75 |
| PGSC0003DMT400012566 | Potato | cytosol | 24.82 | 23.16 |
| PGSC0003DMT400060272 | Potato | cytosol | 22.2 | 23.02 |
| PGSC0003DMT400002079 | Potato | cytosol | 22.43 | 22.49 |
| PGSC0003DMT400065698 | Potato | cytosol | 21.72 | 21.67 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR003613 | InterPro:IPR011989 |
| InterPro:IPR013083 | UniProt:M1CSR6 | PFAM:PF04564 | EnsemblPlantsGene:PGSC0003DMG400028687 | PGSC:PGSC0003DMG400028687 | EnsemblPlants:PGSC0003DMT400073836 |
| PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF61 | SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 |
| UniParc:UPI000294FC0F | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
E3 ubiquitin ligase PUB14 [Source:PGSC_GENE;Acc:PGSC0003DMG400028687]
Coordinates
chr11:+:6639380..6640846
Molecular Weight (calculated)
47581.6 Da
IEP (calculated)
7.571
GRAVY (calculated)
-0.011
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLNSCKELT IPSHFLCPIS LDLMKDPVTL CTGISYDREN IEKWIEARNS TCPVTNQPLR NFDIIPNHTI RKMIQDWCVE NKNYGIERVP TPRIPIDSSQ
101: VTEICSRLMI EAQRGNEKKC RELVGRVRIL AKESERNKKC IVECGVGYVF ATCFEIFSMG IQEELLKDLL SGMTWMFPIG QEGILKLVSS TSLRCMARFL
201: RGEDLSARQN AVIVMKELLY YDQSCTNVLI DIEDLVESLY QMVKVPICPS TTKASLTVIY SIISYTSSEN NKKIVSKFVN MGLVCLVLEM LVDCEKSIIE
301: KGLAILDIFC NFEEGKQKAY EHGLTMAIIA KKIMRVTEMA TECSISILWK LCKSGSNENN SVIEALELGV FQKLLVVLQV GCGEKTKEKA TELLKLMNLY
401: KDRVDCFDGS TFKYLKKSY
101: VTEICSRLMI EAQRGNEKKC RELVGRVRIL AKESERNKKC IVECGVGYVF ATCFEIFSMG IQEELLKDLL SGMTWMFPIG QEGILKLVSS TSLRCMARFL
201: RGEDLSARQN AVIVMKELLY YDQSCTNVLI DIEDLVESLY QMVKVPICPS TTKASLTVIY SIISYTSSEN NKKIVSKFVN MGLVCLVLEM LVDCEKSIIE
301: KGLAILDIFC NFEEGKQKAY EHGLTMAIIA KKIMRVTEMA TECSISILWK LCKSGSNENN SVIEALELGV FQKLLVVLQV GCGEKTKEKA TELLKLMNLY
401: KDRVDCFDGS TFKYLKKSY
001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF
Arabidopsis Description
PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.