Factsheet for Bra001067.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	97.01	97.01
Bra040605.1-P	Field mustard	mitochondrion	82.07	80.53
AT3G02840.1	Thale cress	mitochondrion	76.63	74.41
KRG97963	Soybean	mitochondrion	39.67	33.87
KRH30918	Soybean	mitochondrion	39.67	33.56
KRH72959	Soybean	cytosol, mitochondrion	39.4	33.1
KRH17309	Soybean	cytosol, mitochondrion	38.32	32.12
Bra039752.1-P	Field mustard	cytosol	36.14	31.52
PGSC0003DMT400073836	Potato	cytosol	35.87	31.5
Solyc11g006030.1.1	Tomato	cytosol	35.6	30.47
Bra025442.1-P	Field mustard	mitochondrion	35.87	30.14
GSMUA_Achr11P...	Banana	mitochondrion	34.78	30.12
GSMUA_Achr10P...	Banana	cytosol	30.71	30.05
GSMUA_Achr6P11310_001	Banana	cytosol	29.62	28.68
Zm00001d017976_P001	Maize	mitochondrion	34.78	28.32
Zm00001d044734_P001	Maize	mitochondrion	33.7	28.05
Os06t0248500-00	Rice	mitochondrion	34.51	28.04
TraesCS7B01G105600.1	Wheat	mitochondrion	32.88	27.13
EES05563	Sorghum	mitochondrion	33.97	27.06
GSMUA_Achr6P02470_001	Banana	mitochondrion	27.72	26.84
TraesCS4D01G229900.1	Wheat	mitochondrion	32.07	26.82
TraesCS6A01G312600.1	Wheat	mitochondrion	33.15	26.81
Os02t0738200-01	Rice	mitochondrion	33.15	26.75
TraesCS7D01G201600.1	Wheat	mitochondrion	32.07	26.7
TraesCS6D01G292200.1	Wheat	mitochondrion	32.34	26.21
TraesCS6B01G342800.1	Wheat	mitochondrion	32.34	26.21
KXG19704	Sorghum	mitochondrion	32.61	26.14
EER92576	Sorghum	mitochondrion	32.07	25.99
Zm00001d028374_P001	Maize	mitochondrion	31.52	25.95
GSMUA_Achr7P18640_001	Banana	mitochondrion	26.63	25.86
HORVU4Hr1G064070.1	Barley	mitochondrion	30.71	25.68
TraesCS4B01G228700.1	Wheat	mitochondrion	30.43	25.45
GSMUA_Achr3P02030_001	Banana	plastid	28.8	25.3
Os03t0240600-01	Rice	plastid	29.89	24.72
HORVU7Hr1G040790.2	Barley	plastid	32.34	24.39
HORVU6Hr1G077120.1	Barley	plastid	33.15	23.83
Bra005309.1-P	Field mustard	cytosol	25.0	23.77
Zm00001d030251_P001	Maize	cytosol	28.26	23.42
Bra012803.1-P	Field mustard	cytosol	26.09	22.7
Bra023044.1-P	Field mustard	cytosol	25.0	22.49
Bra017278.1-P	Field mustard	cytosol	25.0	22.33
KXG38738	Sorghum	plastid	29.08	21.66
Bra033430.1-P	Field mustard	cytosol	24.73	21.46
Bra006925.1-P	Field mustard	cytosol	24.73	20.92
Bra022415.1-P	Field mustard	cytosol	22.28	19.43
Bra022417.1-P	Field mustard	cytosol	22.28	19.43
Bra038205.1-P	Field mustard	cytosol	22.01	19.42
TraesCS5A01G088600.1	Wheat	cytosol	17.93	19.3
Bra014206.1-P	Field mustard	cytosol	22.01	19.15
Bra022347.1-P	Field mustard	cytosol	21.74	18.87
Bra024318.1-P	Field mustard	cytosol	20.92	18.38
Bra038683.1-P	Field mustard	cytosol	22.28	18.34
Bra034806.1-P	Field mustard	cytosol	22.55	17.77
Bra001424.1-P	Field mustard	cytosol	22.28	17.52
Bra001717.1-P	Field mustard	cytosol	20.11	17.45
Bra029975.1-P	Field mustard	cytosol	20.38	16.93
Bra037833.1-P	Field mustard	cytosol	20.11	16.7
Bra037568.1-P	Field mustard	cytosol	17.66	15.74

Protein Annotations

EnsemblPlants:Bra001067.1	EnsemblPlants:Bra001067.1-P	EnsemblPlantsGene:Bra001067	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	ncoils:Coil	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61
SUPFAM:SSF48371	UniParc:UPI00025408DA	UniProt:M4CA38	MapMan:35.1	:	:

Description

AT3G02840 (E=3e-152) | immediate-early fungal elicitor family protein

Coordinates

chrA03:+:14583683..14584789

Molecular Weight (calculated)

41221.5 Da

IEP (calculated)

9.529

GRAVY (calculated)

-0.093

Length

368 amino acids

Sequence
(BLAST)

001: MVLPWRSRGG KRPNQLTISD AETKTPAAQF RSSRIELVQS PRVPLTPRAA SSICRRLENA TAREEHVECF KIVSKIKNLV RESGETNKKC LLQNGVVSAL
101: TSCFQRFSST REEQARLLEE VLSVLTYWLP LSRTEGFTKM GTTASLNRLV RFLNATDAKT RQNAAVCIRE VIAVDKKYVY ALTDIEGACE GLIKIIGDSV
201: STKASLMAIY RAVSCDDKIA AKFVKLGLVA LIAEMIMNNA EKSVCERCLV VLNVICDNEQ GREDVLRNAL IVPLLVKKIL RVSDLATQCS VSILWKLWRK
301: SGEDHVLLEA LQVGAFEKLL VVLQVGCEEK TKERASELLR NLNRCRNEIE KTNCLDSSMR LKNVKKSF

Best Arabidopsis Sequence Match ( AT3G02840.1 )
(BLAST)

001: MVLPWRSRGG VAKRRNQLIS GDISVVETKI PVQLRSPSRI ERIQSPRVLL TPRDAVEISR RLQNAAAREE YAECLEIVSK IKNLGRGGDT NKKCLVQNGS
101: VLALSSCFER FAAARDGHMR LLEEILFVLS SWLPLNRSEG FNKMGSTASL NCLVRFLNGK DAKTRQNAAF CIREVIAVDK RYVYALTDVE GACEGLVKII
201: RDSVSTSSTK ASLMVIYRAI SSNDKITEKF VKLGLVELIT EMMVNNAEKS VCERSLVVLN ATCDNEQGKE DVLRNALIVP LLVKKILRVS DLATQCSVSI
301: LWKLWKNKKD GECDDRLLVE ALQVGAFEKL LVLLQVGCED KTKEKASELL RNLNRCRNEI EKTNCVDSSM HLKNVKKSF

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M8S5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.