Factsheet for HORVU7Hr1G040790.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G201600.1	Wheat	mitochondrion	86.27	95.25
TraesCS7B01G105600.1	Wheat	mitochondrion	86.89	95.07
Zm00001d044734_P001	Maize	mitochondrion	71.31	78.73
Os06t0248500-00	Rice	mitochondrion	72.75	78.37
KXG19704	Sorghum	mitochondrion	72.95	77.56
TraesCS5A01G088600.1	Wheat	cytosol	45.9	65.5
GSMUA_Achr6P02470_001	Banana	mitochondrion	42.83	55.0
HORVU6Hr1G077120.1	Barley	plastid	57.58	54.88
GSMUA_Achr6P11310_001	Banana	cytosol	42.62	54.74
HORVU2Hr1G123130.1	Barley	cytosol	5.12	54.35
GSMUA_Achr7P18640_001	Banana	mitochondrion	41.39	53.3
HORVU4Hr1G064070.1	Barley	mitochondrion	46.52	51.59
GSMUA_Achr10P...	Banana	cytosol	39.55	51.33
GSMUA_Achr11P...	Banana	mitochondrion	43.44	49.88
VIT_01s0011g06140.t01	Wine grape	mitochondrion	42.42	46.83
GSMUA_Achr3P02030_001	Banana	plastid	39.75	46.3
KRH48691	Soybean	cytosol	39.55	44.16
KRH39018	Soybean	mitochondrion	38.93	43.38
KRH17309	Soybean	cytosol, mitochondrion	38.32	42.6
KRH72959	Soybean	cytosol, mitochondrion	37.7	42.01
KRG97963	Soybean	mitochondrion	36.27	41.07
KRH30918	Soybean	mitochondrion	36.48	40.92
PGSC0003DMT400058621	Potato	cytosol, mitochondrion	37.7	40.8
Solyc04g008100.1.1	Tomato	cytosol	36.68	40.5
PGSC0003DMT400075778	Potato	mitochondrion	36.48	40.27
Solyc01g005160.2.1	Tomato	mitochondrion	37.09	40.22
PGSC0003DMT400073836	Potato	cytosol	33.4	38.9
Solyc11g006030.1.1	Tomato	cytosol	33.61	38.14
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	32.79	36.78
Bra025442.1-P	Field mustard	mitochondrion	32.58	36.3
CDY16432	Canola	cytosol	31.76	36.22
CDY27655	Canola	mitochondrion	32.38	36.07
CDX99694	Canola	mitochondrion	32.17	35.84
Bra039752.1-P	Field mustard	cytosol	30.94	35.78
CDY50319	Canola	cytosol	31.15	35.6
AT1G66160.1	Thale cress	cytosol	30.53	34.57
HORVU2Hr1G076490.1	Barley	mitochondrion	6.15	34.48
CDX92016	Canola	mitochondrion	25.0	33.15
AT3G02840.1	Thale cress	mitochondrion	25.61	32.98
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	24.8	32.88
Bra001067.1-P	Field mustard	mitochondrion	24.39	32.34
CDY28714	Canola	mitochondrion	24.59	32.0
Bra040605.1-P	Field mustard	mitochondrion	24.59	32.0
CDY51529	Canola	mitochondrion	24.39	31.73
HORVU3Hr1G083500.1	Barley	cytosol	26.84	31.72
HORVU6Hr1G089560.1	Barley	plastid	27.87	30.16
HORVU6Hr1G089590.1	Barley	plastid	27.87	30.09
HORVU0Hr1G003810.1	Barley	cytosol	26.43	29.93
HORVU6Hr1G034250.1	Barley	cytosol, nucleus, peroxisome	23.57	26.56
HORVU6Hr1G066870.1	Barley	cytosol	23.16	26.34
HORVU4Hr1G066070.1	Barley	cytosol	24.39	25.87
HORVU7Hr1G093780.1	Barley	cytosol, endoplasmic reticulum, extracellular	20.49	25.58
HORVU2Hr1G123050.1	Barley	cytosol	16.19	23.51
HORVU1Hr1G074180.1	Barley	mitochondrion, plastid	21.11	22.74
HORVU2Hr1G074130.1	Barley	plastid	21.93	20.66

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A287W6F1	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G040790
EnsemblPlants:HORVU7Hr1G040790.2	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698
PANTHER:PTHR22849	PANTHER:PTHR22849:SF16	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000B477D91
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287W6F1]

Coordinates

chrchr7H:+:111351008..111354169

Molecular Weight (calculated)

51278.2 Da

IEP (calculated)

9.172

GRAVY (calculated)

0.164

Length

488 amino acids

Sequence
(BLAST)

001: PTSPSLSLPS NFQPTPTTST PFHSNIPAAA TCVRDRPTQL PVRRMVLPMS RATRLVPELP LLRRGIRRPQ VADDGELAVP AHFRCPISLE LMKDPVTAPT
101: GITYDRESVE GWLARGRATC PVTGGPVRLA DLVPNHATRR MIQDWCVANR AERVPTPKVP VAEADAAEVL DAVSAAARRG NAAACGQVAA RARAIGKESD
201: RNRRCLAAAG AARQLSSAFQ SLAGEPVEGT SAAVLGALGK ILAALTVFFP LDDEARRCIA SPASLKTLVS VLSHGDLAAR ASAAIVLREL ASSADRHTVD
301: VIARTPGVCG ALVGLVRNPV SPQATKAALV TAYYLVSGSD RAAARFAELG AVPVVAELLV DADKGTSEKA LAMLDGVLCA DAGLESARAH ALVVPVLVKK
401: MFRVSDMATE FAVSALWRLC RASDTAAAAC CAEALRVGAF QKLLLLLQVG CGGVTKDRAS ELLKLLNGFR GSVECIETVD FKGLKRPF

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.