Factsheet for TraesCS7D01G201600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G105600.1	Wheat	mitochondrion	97.29	96.41
HORVU7Hr1G040790.2	Barley	plastid	95.25	86.27
Zm00001d044734_P001	Maize	mitochondrion	76.47	76.47
Os06t0248500-00	Rice	mitochondrion	78.28	76.38
KXG19704	Sorghum	mitochondrion	78.05	75.16
TraesCS5A01G088600.1	Wheat	cytosol	49.55	64.04
TraesCS6D01G292200.1	Wheat	mitochondrion	62.44	60.79
GSMUA_Achr6P02470_001	Banana	mitochondrion	47.51	55.26
GSMUA_Achr6P11310_001	Banana	cytosol	46.38	53.95
GSMUA_Achr7P18640_001	Banana	mitochondrion	45.7	53.3
TraesCS4D01G229900.1	Wheat	mitochondrion	52.04	52.27
GSMUA_Achr10P...	Banana	cytosol	43.89	51.6
GSMUA_Achr11P...	Banana	mitochondrion	47.96	49.88
VIT_01s0011g06140.t01	Wine grape	mitochondrion	46.83	46.83
GSMUA_Achr3P02030_001	Banana	plastid	43.44	45.82
KRH48691	Soybean	cytosol	43.89	44.39
KRH39018	Soybean	mitochondrion	43.21	43.61
KRH17309	Soybean	cytosol, mitochondrion	42.31	42.6
KRH72959	Soybean	cytosol, mitochondrion	41.86	42.24
KRG97963	Soybean	mitochondrion	40.27	41.3
PGSC0003DMT400058621	Potato	cytosol, mitochondrion	41.86	41.02
KRH30918	Soybean	mitochondrion	40.27	40.92
Solyc01g005160.2.1	Tomato	mitochondrion	41.4	40.67
Solyc04g008100.1.1	Tomato	cytosol	40.5	40.5
PGSC0003DMT400075778	Potato	mitochondrion	40.27	40.27
PGSC0003DMT400073836	Potato	cytosol	36.65	38.66
Solyc11g006030.1.1	Tomato	cytosol	37.1	38.14
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	36.2	36.78
CDY16432	Canola	cytosol	35.52	36.68
CDY50319	Canola	cytosol	35.07	36.3
Bra039752.1-P	Field mustard	cytosol	34.62	36.26
Bra025442.1-P	Field mustard	mitochondrion	35.75	36.07
CDY27655	Canola	mitochondrion	35.52	35.84
CDX99694	Canola	mitochondrion	35.29	35.62
AT1G66160.1	Thale cress	cytosol	33.03	33.87
AT3G02840.1	Thale cress	mitochondrion	28.05	32.72
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	27.15	32.61
CDX92016	Canola	mitochondrion	27.15	32.61
TraesCS6D01G237900.1	Wheat	extracellular	29.64	32.19
TraesCS6D01G367600.1	Wheat	cytosol	30.77	32.15
Bra001067.1-P	Field mustard	mitochondrion	26.7	32.07
TraesCS3D01G370000.1	Wheat	cytosol	29.86	31.58
Bra040605.1-P	Field mustard	mitochondrion	26.7	31.47
CDY28714	Canola	mitochondrion	26.7	31.47
CDY51529	Canola	mitochondrion	26.47	31.2
TraesCS6D01G367100.1	Wheat	cytosol	29.64	31.19
TraesCS2D01G296100.1	Wheat	cytosol	29.64	30.39
TraesCS2D01G305400.1	Wheat	cytosol	25.11	27.75
TraesCS6D01G251200.1	Wheat	cytosol	26.02	26.62
TraesCS6D01G167300.1	Wheat	cytosol	25.79	26.33
TraesCS2D01G594700.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	25.34	26.23
TraesCS7D01G393700.1	Wheat	extracellular, vacuole	22.4	25.92
TraesCS4D01G237600.1	Wheat	cytosol	26.7	25.71
TraesCS2D01G449900.1	Wheat	cytosol	23.76	25.12
TraesCS2D01G296700.1	Wheat	cytosol, mitochondrion, plastid	23.98	24.04
TraesCS1D01G274600.1	Wheat	mitochondrion	21.95	21.41

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF16	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7D01G201600	EnsemblPlants:TraesCS7D01G201600.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16664	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:160628998..160630326

Molecular Weight (calculated)

46383.3 Da

IEP (calculated)

8.733

GRAVY (calculated)

0.189

Length

442 amino acids

Sequence
(BLAST)

001: MSRATRLVPE LPLLRRGRRP QVADAGNEEE LAVPAHFRCP ISLELMKDPV TAPTGITYDR ESVEGWLARG RATCPVTGGP VRLSDLVPNH ATRRMIQDWC
101: VANQAERVPT PKVPVAEADA AEVLAAVSTA ARRGNAPVCG QLAARARAIG KESDRNRRCL AAAGAARQLS SAFQSLAGEP VEGTSAAVMG ALGKILAALT
201: VFFPLDDEAR RCIASPASLK TLVSVLSHGD LAARASAAIV LRELASSADR HTVDVISRTP GVCSALVGLV RNPVSPQATK AALVTAYYLV SGSDRAAARF
301: AELGAVPVVA ELLVDADKGT SEKALAVLDS VLCADAGLES ARAHALVVPV LVKKMFRVSD MATEFAVSAL WRLCRAADAG AGACCAEALR VGAFQKLLLL
401: LQVGCGGVTK DRASELLKLL NGFRGSVECI ETVDFRGLKR PF

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.