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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 3
  • mitochondrion 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G256700.1 Wheat extracellular 98.53 98.53
TraesCS6B01G268300.1 Wheat extracellular 98.28 98.28
EES06938 Sorghum extracellular 86.24 86.24
Zm00001d050712_P001 Maize extracellular, plastid 84.28 83.86
Os02t0548700-00 Rice cytosol, extracellular, plastid 85.01 82.97
Zm00001d016764_P001 Maize extracellular 82.56 80.38
GSMUA_Achr9P08750_001 Banana cytosol, plasma membrane, plastid 56.27 66.38
GSMUA_Achr1P13220_001 Banana cytosol 61.43 63.13
GSMUA_Achr6P25670_001 Banana cytosol 61.67 58.64
PGSC0003DMT400066588 Potato cytosol 52.58 51.57
Solyc01g107980.2.1 Tomato cytosol 52.58 51.57
KRH50316 Soybean cytosol, plasma membrane, plastid 50.86 50.0
CDY50158 Canola cytosol 50.86 49.64
Bra038205.1-P Field mustard cytosol 50.86 49.64
KRH70657 Soybean cytosol 50.61 49.64
CDX92328 Canola cytosol 51.35 49.41
CDX99233 Canola cytosol, peroxisome, plastid 51.11 49.41
CDX95458 Canola cytosol 50.61 49.4
VIT_03s0063g00180.t01 Wine grape cytosol 50.37 49.4
Bra022415.1-P Field mustard cytosol 50.86 49.05
Bra022417.1-P Field mustard cytosol 50.86 49.05
AT3G19380.1 Thale cress cytosol, golgi, plastid 49.88 48.22
Bra014206.1-P Field mustard cytosol 49.63 47.75
CDY16513 Canola cytosol 49.63 47.75
CDY59286 Canola cytosol 49.63 47.75
AT1G49780.1 Thale cress cytoskeleton, cytosol, vacuole 48.89 47.27
TraesCS2D01G305400.1 Wheat cytosol 31.94 32.5
TraesCS7D01G201600.1 Wheat mitochondrion 32.19 29.64
TraesCS4D01G229900.1 Wheat mitochondrion 30.71 28.41
TraesCS3D01G370000.1 Wheat cytosol 28.75 27.99
TraesCS2D01G296100.1 Wheat cytosol 29.24 27.61
TraesCS7D01G393700.1 Wheat extracellular, vacuole 25.8 27.49
TraesCS6D01G367600.1 Wheat cytosol 28.26 27.19
TraesCS6D01G367100.1 Wheat cytosol 27.76 26.9
TraesCS6D01G292200.1 Wheat mitochondrion 29.73 26.65
TraesCS2D01G296700.1 Wheat cytosol, mitochondrion, plastid 27.03 24.94
TraesCS2D01G594700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 26.04 24.82
TraesCS2D01G449900.1 Wheat cytosol 25.06 24.4
TraesCS6D01G251200.1 Wheat cytosol 25.06 23.61
TraesCS1D01G274600.1 Wheat mitochondrion 25.55 22.96
TraesCS4D01G237600.1 Wheat cytosol 25.31 22.44
TraesCS6D01G167300.1 Wheat cytosol 23.59 22.17
Protein Annotations
Gene3D:1.25.10.10Gene3D:3.30.40.10MapMan:35.1InterPro:ARM-likeInterPro:ARM-type_foldGO:GO:0003674
GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538InterPro:IPR003613InterPro:IPR011989
InterPro:IPR013083PFAM:PF04564PFscan:PS51698PANTHER:PTHR22849PANTHER:PTHR22849:SF56SMART:SM00504
SUPFAM:SSF48371SUPFAM:SSF57850EnsemblPlantsGene:TraesCS6D01G237900EnsemblPlants:TraesCS6D01G237900.1InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHD
TIGR:cd16664SEG:seg::::
Description
No Description!
Coordinates
chr6D:-:337840866..337842411
Molecular Weight (calculated)
42409.5 Da
IEP (calculated)
8.134
GRAVY (calculated)
0.180
Length
407 amino acids
Sequence
(BLAST)
001: MPGSVPLALG LDTVGLQVPW YFRCPISLEL MQDPVTVATG QTYDRASIES WVATGNTTCP VTRAPLADFT LIPNHTLRRL IQEWCVAHRS LGVERIPTPK
101: QPADPDLIRS LIAQGPALPV LRKLRALARE SDKNRLVMAT HETRAALVEM AFGGSAEEAQ AEAMAVLALV GMGEAEAVDV VGREDRVTRL GKVLGSQGTT
201: LEAKVNAGAV VEAAAAVSGA EARVVLGAAD GVIEGLVALV DEKANARAVR IGIRGVFALC LAKENRQRAV SAGAASALAR RVAEGGCAGE LERALAAVER
301: LSRTEGGREA VVSGAGGGAA LVIALVRAMS GRAAEHAAGA LVAVVGGSEV LQLEAVRAGA MSQLLMMVQG GCSERAKRKA QHLLKLLRSA WPTTDSMANS
401: ADFLQPY
Best Arabidopsis Sequence Match ( AT1G49780.1 )
(BLAST)
001: MPGNLEPLDL GIQIPYHFRC PISLDLMSDP VTISTGQTYD RTSIDSWIAM GNTTCPVTRV ALSDFTLIPN HTLRRLIQEW CVANRSNGVE RIPTPKQPAD
101: PISVRSLLSQ ASAITGTHVS VRSRAAAIRR LRGLARDSEK NRVLIAGHNA REILVRILFA DIETTSLSSE LVSESLALLV LLHMTETECE AVASDPSRVG
201: FMTRLLFDSS IEIRVNAAAL IEMVLTGAKS MDLKLIISGS DSIFEGVLDL LKNPISSRRA LKIGIKAIFA LCLVKQTRHL AISAGAPGIL IDRLAADFDR
301: CDTERGLATV ELLCRLPEGC AAFGEHALTV PLMVKTILRV SDRATEYAAG ALLALCTAEE RCRDEAAAAG LVTQLLLLVQ SDCTERAKRK AQMLLKLLRD
401: SWPDDSTVHS DDFNRSEVAP F
Arabidopsis Description
PUB26U-box domain-containing protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXA4]
SUBAcon: [cytosol,cytoskeleton,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.