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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • plastid 2
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35930.1 TraesCS2B01G531300.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS5B01G123900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS6A01G316200.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS6B01G346700.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS6D01G295500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177600.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177700.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177800.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G232500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G236700.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G082900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083100.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083200.2 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083300.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083400.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G130900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G178900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179000.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179100.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179200.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179300.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179400.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179600.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G232600.1 AT4G25200.1 21798944
AT3G52450.1 TraesCS1A01G297800.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1B01G307200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1D01G293400.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3A01G348200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3B01G380100.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3D01G341800.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1A01G297800.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1B01G307200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1D01G293400.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3A01G348200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3B01G380100.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3D01G341800.1 AT1G07000.1 23170036
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G376900.1 Wheat cytosol 97.85 97.85
TraesCS3B01G409400.1 Wheat cytosol 97.37 97.6
HORVU3Hr1G083500.1 Barley cytosol 96.17 97.34
Os01t0865700-00 Rice plastid 84.69 86.98
EES03937 Sorghum plastid 78.47 80.39
Zm00001d042738_P001 Maize cytosol 76.08 77.94
GSMUA_Achr7P03220_001 Banana cytosol 42.58 57.42
GSMUA_Achr5P01000_001 Banana cytosol 45.69 53.8
Solyc01g007030.2.1 Tomato cytosol 24.88 49.29
PGSC0003DMT400055045 Potato cytosol 24.88 49.29
KRH22633 Soybean cytosol, nucleus 45.22 46.9
KRH26691 Soybean cytosol 42.58 45.99
TraesCS2D01G594700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 46.41 45.43
VIT_08s0105g00180.t01 Wine grape cytosol, plastid, vacuole 44.02 44.77
VIT_06s0009g00320.t01 Wine grape cytosol 44.26 44.69
VIT_08s0105g00190.t01 Wine grape cytosol, plastid, vacuole 43.78 44.53
CDX75084 Canola cytosol 43.06 44.34
CDX78096 Canola cytosol 41.15 44.22
CDX79645 Canola cytosol 43.06 44.12
KRH25324 Soybean cytosol 38.28 44.08
Solyc11g068920.1.1 Tomato cytosol 42.58 44.06
AT2G35930.1 Thale cress cytosol 43.3 44.04
CDX95337 Canola cytosol 43.06 44.01
Bra005309.1-P Field mustard cytosol 40.67 43.93
PGSC0003DMT400050493 Potato cytosol 42.34 43.81
KRH32856 Soybean cytosol 44.02 43.81
Bra023044.1-P Field mustard cytosol 42.58 43.52
CDX84587 Canola cytosol 42.58 43.52
CDY32070 Canola cytosol 42.82 43.45
Solyc01g009330.1.1 Tomato cytosol 44.26 43.43
CDX84168 Canola cytosol 42.11 43.35
TraesCS6D01G367100.1 Wheat cytosol 43.54 43.33
KRH72176 Soybean cytosol 43.3 43.3
CDY59599 Canola cytosol 42.34 43.28
TraesCS6D01G367600.1 Wheat cytosol 43.78 43.26
CDY40422 Canola cytosol 42.58 43.2
Bra017278.1-P Field mustard cytosol 42.58 43.2
KRH68014 Soybean cytosol 43.3 43.1
CDY23218 Canola cytosol 40.67 42.93
KRH35744 Soybean cytosol 42.82 42.72
KRG96257 Soybean cytosol 42.58 42.48
KRG96268 Soybean cytosol 42.34 42.24
PGSC0003DMT400054949 Potato cytosol 40.91 42.12
Bra012803.1-P Field mustard cytosol 42.34 41.84
Solyc01g007000.2.1 Tomato cytosol, nucleus, vacuole 40.91 41.81
TraesCS2D01G296100.1 Wheat cytosol 43.06 41.76
PGSC0003DMT400055049 Potato cytosol, nucleus, plasma membrane 40.43 41.63
PGSC0003DMT400055050 Potato cytosol 39.0 41.58
PGSC0003DMT400055051 Potato cytosol 39.0 41.37
AT3G52450.1 Thale cress cytosol 42.82 41.15
Bra033430.1-P Field mustard cytosol 41.63 41.04
Solyc01g007020.2.1 Tomato cytosol 39.95 40.93
Bra006925.1-P Field mustard cytosol 42.58 40.92
PGSC0003DMT400038197 Potato cytosol 44.02 40.53
Solyc01g007010.2.1 Tomato cytosol 39.47 40.44
PGSC0003DMT400054947 Potato cytosol 28.71 39.74
TraesCS6D01G167300.1 Wheat cytosol 36.84 35.57
PGSC0003DMT400054948 Potato cytosol 24.16 35.44
Solyc01g007040.2.1 Tomato cytosol, nucleus, vacuole 14.35 33.52
TraesCS2D01G449900.1 Wheat cytosol 30.62 30.62
TraesCS6D01G251200.1 Wheat cytosol 31.58 30.56
GSMUA_Achr9P29630_001 Banana cytosol 44.26 29.94
TraesCS7D01G201600.1 Wheat mitochondrion 31.58 29.86
TraesCS6D01G292200.1 Wheat mitochondrion 31.58 29.07
TraesCS7D01G393700.1 Wheat extracellular, vacuole 26.32 28.8
TraesCS6D01G237900.1 Wheat extracellular 27.99 28.75
TraesCS2D01G305400.1 Wheat cytosol 26.79 28.0
TraesCS4D01G229900.1 Wheat mitochondrion 28.95 27.5
TraesCS2D01G296700.1 Wheat cytosol, mitochondrion, plastid 28.71 27.21
TraesCS4D01G237600.1 Wheat cytosol 28.95 26.36
TraesCS1D01G274600.1 Wheat mitochondrion 24.16 22.3
Protein Annotations
Gene3D:1.25.10.10Gene3D:3.30.40.10MapMan:35.1InterPro:ARM-likeInterPro:ARM-type_foldInterPro:Armadillo
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0005515
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740
GO:GO:0019538InterPro:IPR000225InterPro:IPR003613InterPro:IPR011989InterPro:IPR013083PFAM:PF04564
PFscan:PS50176PFscan:PS51698PANTHER:PTHR22849PANTHER:PTHR22849:SF66SMART:SM00504SUPFAM:SSF48371
SUPFAM:SSF57850EnsemblPlantsGene:TraesCS3D01G370000EnsemblPlants:TraesCS3D01G370000.1InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHDTIGR:cd16664
SEG:seg:::::
Description
No Description!
Coordinates
chr3D:-:482606898..482608154
Molecular Weight (calculated)
44528.3 Da
IEP (calculated)
8.955
GRAVY (calculated)
0.187
Length
418 amino acids
Sequence
(BLAST)
001: MSAAMAAPSA LPAEVPSYFL CPISLQLMRD PVTLPTGISY DRAAISRWLA ASAAPAACST SQRTCPVTRQ PLEPELQLTP NHTLRRLIGS WVASVSPGSD
101: VEGEVAALRP VRRDELAKLL SDAAAAQVGA LRKLGELVAE CEDTRAMLES QDGVFDALSR VLTGASACST AREEAVGVLS SLRIPEQELV RVVSRHGNLA
201: ESLTAVLRSS NLQSRAQAVR LVRSLADVSV PAWVIGLNQE LLAEVIRVVR DRVSTRATKA ALHALSALCP YGRNRVKIVG AGAVPALVEL LLDEPERRVC
301: ELALAVLDRL CTCAEGRAEL VAHAAGVAVV GKKVLRVSEA ASERAVRVLR SVARHAATPA VLQEMAQAGV VGKLCLALRS ELCGVKTKEK AHEVLKLHSR
401: IWRSSPCLSP KFLALYPS
Best Arabidopsis Sequence Match ( AT3G11840.1 )
(BLAST)
001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
Arabidopsis Description
PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.