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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH23958
KRH39841
KRH44640
KRH47011

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35930.1 KRH23958 AT4G25200.1 21798944
AT2G35930.1 KRH39841 AT4G25200.1 21798944
AT3G52450.1 KRH44640 AT5G49830.2 23170036
AT3G52450.1 KRH47011 AT5G49830.2 23170036
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH32856 Soybean cytosol 92.11 91.67
KRH35744 Soybean cytosol 69.86 69.69
KRH68014 Soybean cytosol 69.62 69.29
KRG96257 Soybean cytosol 69.38 69.21
KRG96268 Soybean cytosol 69.14 68.97
VIT_08s0105g00190.t01 Wine grape cytosol, plastid, vacuole 61.72 62.77
VIT_08s0105g00180.t01 Wine grape cytosol, plastid, vacuole 61.48 62.53
PGSC0003DMT400055045 Potato cytosol 31.1 61.61
Solyc01g007030.2.1 Tomato cytosol 30.86 61.14
PGSC0003DMT400055050 Potato cytosol 55.98 59.69
PGSC0003DMT400054949 Potato cytosol 57.89 59.61
Solyc01g007020.2.1 Tomato cytosol 58.13 59.56
PGSC0003DMT400055051 Potato cytosol 55.98 59.39
PGSC0003DMT400055049 Potato cytosol, nucleus, plasma membrane 57.42 59.11
Solyc01g007000.2.1 Tomato cytosol, nucleus, vacuole 57.66 58.92
Solyc01g007010.2.1 Tomato cytosol 56.7 58.09
CDX78096 Canola cytosol 53.83 57.84
CDX75084 Canola cytosol 55.98 57.64
CDX84168 Canola cytosol 55.74 57.39
Bra005309.1-P Field mustard cytosol 53.11 57.36
CDY23218 Canola cytosol 54.31 57.32
CDX95337 Canola cytosol 55.98 57.21
CDY59599 Canola cytosol 55.98 57.21
PGSC0003DMT400054948 Potato cytosol 39.0 57.19
Solyc01g007040.2.1 Tomato cytosol, nucleus, vacuole 24.4 56.98
CDX79645 Canola cytosol 55.5 56.86
GSMUA_Achr7P03220_001 Banana cytosol 42.11 56.77
AT2G35930.1 Thale cress cytosol 55.5 56.45
CDX84587 Canola cytosol 54.78 55.99
PGSC0003DMT400054947 Potato cytosol 40.43 55.96
Bra023044.1-P Field mustard cytosol 54.55 55.75
KRH22633 Soybean cytosol, nucleus 53.59 55.58
Bra017278.1-P Field mustard cytosol 54.55 55.34
CDY32070 Canola cytosol 54.55 55.34
CDY40422 Canola cytosol 54.55 55.34
Bra033430.1-P Field mustard cytosol 55.74 54.95
Bra012803.1-P Field mustard cytosol 55.5 54.85
HORVU2Hr1G123130.1 Barley cytosol 5.98 54.35
KRH26691 Soybean cytosol 50.24 54.26
Bra006925.1-P Field mustard cytosol 55.98 53.79
KRH25324 Soybean cytosol 46.65 53.72
GSMUA_Achr10P... Banana cytosol 46.17 52.88
AT3G52450.1 Thale cress cytosol 55.02 52.87
GSMUA_Achr11P... Banana cytosol 47.13 52.81
GSMUA_Achr8P30400_001 Banana cytosol 44.98 51.23
GSMUA_Achr5P01000_001 Banana cytosol 43.06 50.7
Os04t0686000-01 Rice cytosol 45.22 45.76
TraesCS6B01G420600.1 Wheat cytosol 45.45 45.24
TraesCS6B01G421400.1 Wheat cytosol 45.45 45.24
TraesCS6D01G367600.1 Wheat cytosol 45.69 45.15
OQU85086 Sorghum cytosol 45.93 44.96
TraesCS6D01G367100.1 Wheat cytosol 44.98 44.76
EES06927 Sorghum cytosol 45.22 44.58
TraesCS6B01G421900.1 Wheat cytosol 44.5 44.29
TraesCS6A01G382300.1 Wheat cytosol 44.5 44.08
Os01t0865700-00 Rice plastid 42.82 43.98
TraesCS6A01G382800.1 Wheat cytosol 44.26 43.84
EES13136 Sorghum cytosol 44.5 43.66
HORVU3Hr1G083500.1 Barley cytosol 43.06 43.58
TraesCS3D01G370000.1 Wheat cytosol 43.3 43.3
TraesCS3B01G409400.1 Wheat cytosol 42.82 42.93
KRH26690 Soybean cytosol 43.78 42.86
Os02t0539200-01 Rice cytosol 45.22 42.76
KRH72180 Soybean cytosol 23.68 42.67
Zm00001d001769_P001 Maize cytosol, endoplasmic reticulum, peroxisome 39.95 42.6
TraesCS3A01G376900.1 Wheat cytosol 42.58 42.58
HORVU6Hr1G089560.1 Barley plastid 45.93 42.57
HORVU6Hr1G089590.1 Barley plastid 45.93 42.48
KRH22634 Soybean cytosol 42.82 42.42
EES03937 Sorghum plastid 41.15 42.16
Zm00001d016730_P001 Maize cytosol 43.54 41.74
Zm00001d042738_P001 Maize cytosol 40.43 41.42
KRH68013 Soybean cytosol 28.95 40.88
Zm00001d003745_P001 Maize nucleus 43.78 40.85
KRH25323 Soybean cytosol 39.47 40.84
HORVU0Hr1G003810.1 Barley cytosol 42.11 40.84
TraesCS2A01G298000.1 Wheat cytosol 41.87 40.6
TraesCS2D01G296100.1 Wheat cytosol 41.63 40.37
KRG88869 Soybean cytosol 40.19 40.29
TraesCS2B01G314500.1 Wheat cytosol 41.39 40.14
KXG26241 Sorghum cytosol 43.06 38.96
TraesCS2B01G601300.1 Wheat cytosol 35.65 34.89
TraesCS2D01G594700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 35.17 34.43
TraesCSU01G036400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 35.17 34.43
KRH50316 Soybean cytosol, plasma membrane, plastid 33.49 33.82
KRH70657 Soybean cytosol 33.01 33.25
TraesCS6B01G209000.1 Wheat cytosol 33.25 32.86
TraesCS6A01G176800.1 Wheat cytosol 33.01 31.94
TraesCS6D01G167300.1 Wheat cytosol 33.01 31.87
KRH72959 Soybean cytosol, mitochondrion 33.25 31.74
HORVU2Hr1G123050.1 Barley cytosol 25.36 31.55
HORVU6Hr1G034250.1 Barley cytosol, nucleus, peroxisome 32.3 31.18
KRH39018 Soybean mitochondrion 32.54 31.05
KRH30918 Soybean mitochondrion 32.3 31.03
KRH17309 Soybean cytosol, mitochondrion 32.3 30.75
KRG97963 Soybean mitochondrion 31.34 30.39
KRH48691 Soybean cytosol 31.58 30.21
KXG23010 Sorghum cytosol 32.54 29.96
GSMUA_Achr9P29630_001 Banana cytosol 43.54 29.45
Os12t0161100-00 Rice cytosol 29.67 28.25
KRH53869 Soybean cytosol 27.27 27.34
KRH40934 Soybean cytosol 25.36 27.32
KRH59546 Soybean cytosol 26.55 26.55
KRH55660 Soybean cytosol 7.89 26.4
KRH43397 Soybean cytosol 26.32 26.32
KRH59579 Soybean cytosol 23.45 26.2
KRH53906 Soybean cytosol 24.4 25.89
KRH52124 Soybean cytosol 26.32 25.88
KRH61438 Soybean cytosol 26.08 25.83
KRH77156 Soybean cytosol 27.27 25.39
KRH05554 Soybean cytosol 25.36 25.3
KRH58142 Soybean cytosol 26.55 25.0
KRH64033 Soybean cytosol 23.45 24.94
KRG88755 Soybean cytosol 25.36 24.65
KRH08734 Soybean mitochondrion 24.4 24.64
KRH70331 Soybean mitochondrion 23.68 24.32
KRH36899 Soybean cytosol 21.53 24.26
KRH28330 Soybean plastid 27.75 22.57
Zm00001d023480_P001 Maize cytosol 29.67 22.18
Protein Annotations
Gene3D:1.25.10.10EntrezGene:100795263Gene3D:3.30.40.10MapMan:35.1EMBL:ACUP02001176InterPro:ARM-like
InterPro:ARM-type_foldEnsemblPlantsGene:GLYMA_02G195900GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740
GO:GO:0019538UniProt:I1JGH3InterPro:IPR003613InterPro:IPR011989InterPro:IPR013083EnsemblPlants:KRH72176
ProteinID:KRH72176ProteinID:KRH72176.1PFAM:PF04564PFscan:PS51698PANTHER:PTHR22849PANTHER:PTHR22849:SF54
SMART:SM00504SUPFAM:SSF48371SUPFAM:SSF57850UniParc:UPI00023370FAInterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:37011827..37013083
Molecular Weight (calculated)
45953.2 Da
IEP (calculated)
7.918
GRAVY (calculated)
0.070
Length
418 amino acids
Sequence
(BLAST)
001: MDEIDVPPFF VCPISLELMK DPVTVSTGIT YDRDSIEKWL FAEVKNDTCP VTKQPLLPDL TPNHTLRRLI QAWCTVNASH GVQRIPTPKP PVDKTLIEKL
101: LRNTSASDSP SLQLRSLRTL KSIASESQSN KRCIESAEGA VNFLATIITT TTTTTTNLLD DDIELEIKTS TAHEALSLLH SIQLSESGLK ALLNHPEFIN
201: SLTKMMQRGI YESRAYAVFL LNSLSEVADP AQLINLKTDL FTELVQVLKD QVSEKVSKAT LQALIQVCSW GRNRVKAVEA GAVPVLVELL LECNERKPIE
301: MVLVLLEILC QSADGRAGLL AHAAGVVIVA KKILRVSTMA NDRAAKILLS VCRFSPTPGL VQEMVQLGVV AKLCLVLQVD SGNKAKEKAR EILKLHARAW
401: RNSPCIPHNL LASFPMSS
Best Arabidopsis Sequence Match ( AT2G35930.1 )
(BLAST)
001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
Arabidopsis Description
PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.