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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • endoplasmic reticulum 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35930.1 TraesCS2B01G531300.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS5B01G123900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS6A01G316200.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS6B01G346700.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS6D01G295500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177600.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177700.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G177800.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G232500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7A01G236700.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G082900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083100.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083200.2 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083300.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083400.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G083500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7B01G130900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G178900.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179000.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179100.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179200.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179300.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179400.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179500.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G179600.1 AT4G25200.1 21798944
AT2G35930.1 TraesCS7D01G232600.1 AT4G25200.1 21798944
AT3G52450.1 TraesCS1A01G297800.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1B01G307200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1D01G293400.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3A01G348200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3B01G380100.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3D01G341800.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1A01G297800.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1B01G307200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS1D01G293400.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3A01G348200.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3B01G380100.1 AT1G07000.1 23170036
AT3G52450.1 TraesCS3D01G341800.1 AT1G07000.1 23170036
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G123130.1 Barley cytosol 10.54 97.83
TraesCSU01G036400.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 94.15 94.15
TraesCS2D01G594700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 93.21 93.21
HORVU2Hr1G123050.1 Barley cytosol 69.56 88.39
Os04t0686000-01 Rice cytosol 63.0 65.13
EES13136 Sorghum cytosol 63.23 63.38
Zm00001d001769_P001 Maize cytosol, endoplasmic reticulum, peroxisome 53.4 58.16
TraesCS3B01G409400.1 Wheat cytosol 45.43 46.52
GSMUA_Achr7P03220_001 Banana cytosol 33.72 46.45
GSMUA_Achr5P01000_001 Banana cytosol 37.47 45.07
PGSC0003DMT400055045 Potato cytosol 21.78 44.08
Solyc01g007030.2.1 Tomato cytosol 21.55 43.6
TraesCS6B01G421400.1 Wheat cytosol 40.52 41.19
TraesCS6B01G420600.1 Wheat cytosol 40.05 40.71
TraesCS6B01G421900.1 Wheat cytosol 39.81 40.48
TraesCS2B01G314500.1 Wheat cytosol 40.28 39.91
KRH22633 Soybean cytosol, nucleus 37.47 39.7
VIT_08s0105g00180.t01 Wine grape cytosol, plastid, vacuole 38.17 39.66
VIT_08s0105g00190.t01 Wine grape cytosol, plastid, vacuole 37.7 39.17
KRH26691 Soybean cytosol 34.89 38.5
KRH25324 Soybean cytosol 31.38 36.91
PGSC0003DMT400054949 Potato cytosol 34.89 36.7
Solyc01g007000.2.1 Tomato cytosol, nucleus, vacuole 35.13 36.67
KRH32856 Soybean cytosol 36.07 36.67
CDX84168 Canola cytosol 34.66 36.45
PGSC0003DMT400055049 Potato cytosol, nucleus, plasma membrane 33.96 35.71
Bra023044.1-P Field mustard cytosol 34.19 35.7
CDX84587 Canola cytosol 34.19 35.7
CDY32070 Canola cytosol 34.43 35.68
KRH72176 Soybean cytosol 34.89 35.65
Solyc11g068920.1.1 Tomato cytosol 33.72 35.64
CDX78096 Canola cytosol 32.32 35.48
CDX75084 Canola cytosol 33.72 35.47
PGSC0003DMT400055050 Potato cytosol 32.55 35.46
CDX95337 Canola cytosol 33.96 35.45
Bra017278.1-P Field mustard cytosol 34.19 35.44
CDY40422 Canola cytosol 34.19 35.44
PGSC0003DMT400050493 Potato cytosol 33.49 35.4
CDX79645 Canola cytosol 33.72 35.29
Solyc01g007020.2.1 Tomato cytosol 33.72 35.29
AT2G35930.1 Thale cress cytosol 33.96 35.28
PGSC0003DMT400055051 Potato cytosol 32.55 35.28
VIT_06s0009g00320.t01 Wine grape cytosol 34.19 35.27
Solyc01g009330.1.1 Tomato cytosol 35.13 35.21
Bra005309.1-P Field mustard cytosol 31.85 35.14
CDY23218 Canola cytosol 32.32 34.85
KRG96257 Soybean cytosol 34.19 34.84
Solyc01g007010.2.1 Tomato cytosol 33.26 34.8
KRH68014 Soybean cytosol 34.19 34.76
KRG96268 Soybean cytosol 33.96 34.61
CDY59599 Canola cytosol 33.02 34.47
KRH35744 Soybean cytosol 33.72 34.37
PGSC0003DMT400054947 Potato cytosol 24.12 34.11
Bra012803.1-P Field mustard cytosol 33.26 33.57
Bra033430.1-P Field mustard cytosol 33.02 33.25
AT3G52450.1 Thale cress cytosol 33.49 32.87
PGSC0003DMT400054948 Potato cytosol 21.78 32.63
Bra006925.1-P Field mustard cytosol 33.02 32.41
PGSC0003DMT400038197 Potato cytosol 34.19 32.16
TraesCS6B01G209000.1 Wheat cytosol 30.91 31.21
Solyc01g007040.2.1 Tomato cytosol, nucleus, vacuole 12.41 29.61
TraesCS2B01G471900.1 Wheat cytosol 27.87 28.47
TraesCS7B01G300000.1 Wheat cytosol, extracellular, nucleus 24.82 27.6
TraesCS6B01G268300.1 Wheat extracellular 25.76 27.03
TraesCS2B01G323600.1 Wheat cytosol 25.29 27.0
TraesCS6B01G290700.1 Wheat cytosol 27.17 26.91
TraesCS7B01G105600.1 Wheat mitochondrion 26.7 25.56
GSMUA_Achr9P29630_001 Banana cytosol 36.77 25.4
TraesCS2B01G315100.1 Wheat cytosol 26.23 25.4
TraesCS6B01G342800.1 Wheat mitochondrion 25.06 23.57
TraesCS4B01G228700.1 Wheat mitochondrion 23.89 23.18
TraesCS1B01G284200.1 Wheat mitochondrion 22.95 21.63
TraesCS4B01G236200.1 Wheat cytosol 23.18 21.57
Protein Annotations
Gene3D:3.30.40.10MapMan:35.1InterPro:ARM-type_foldGO:GO:0003674GO:GO:0003824GO:GO:0004842
GO:GO:0005488GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567
GO:GO:0016740GO:GO:0019538InterPro:IPR003613InterPro:IPR013083PFAM:PF04564PFscan:PS51698
PANTHER:PTHR22849PANTHER:PTHR22849:SF11SMART:SM00504SUPFAM:SSF48371SUPFAM:SSF57850EnsemblPlantsGene:TraesCS2B01G601300
EnsemblPlants:TraesCS2B01G601300.1InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHDTIGR:cd16664SEG:seg:
Description
No Description!
Coordinates
chr2B:+:784268420..784269703
Molecular Weight (calculated)
44914.3 Da
IEP (calculated)
8.502
GRAVY (calculated)
0.154
Length
427 amino acids
Sequence
(BLAST)
001: MEEVEVPSYF VCPITLDVMR DPVTLPTSIT YDRHAIHRWL RLAASCPLTK LPVLPDCEPT PNHTLSRLIR SWCALHRPDD AVDRTMNSAP ADRARLAALV
101: SRLADAKNKG PAREALAALR ELRDVAAEGE RGRELIAAVP GSADALLEVF VASATCAPDY AAAALDVISS LRLPERCLAR AVDRDGAALV GALVSTLQGH
201: SGSDADAASR ARAAVLLADV TACMAPSRAA SLPEQVFVEA VRLLRGDDGM GASTAMATKA ALRVLAGATA HGRNRVKAAE AGAVAALVDL LLLVNGERRR
301: AWCELALCAL NRLCGCAEGR AALVAHGAGV AAVGAWVAGA SMAASAKAVR VLRSIARHAA TVAVVQEMAA TGAVGKLCLV AASAPEEGRQ WCDERTRKRA
401: RETLRLHARA WRSSPCLHPT LQALYPC
Best Arabidopsis Sequence Match ( AT2G35930.1 )
(BLAST)
001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
Arabidopsis Description
PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.