Factsheet for TraesCS7B01G300000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, nucleus

Predictor Summary:

extracellular 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G399900.1	Wheat	extracellular, vacuole	94.27	94.52
TraesCS7D01G393700.1	Wheat	extracellular, vacuole	92.45	92.93
HORVU7Hr1G093780.1	Barley	cytosol, endoplasmic reticulum, extracellular	89.58	87.98
GSMUA_Achr7P23310_001	Banana	cytosol, peroxisome, plastid	43.75	42.21
GSMUA_Achr2P20690_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	44.01	42.14
TraesCS2B01G323600.1	Wheat	cytosol	41.41	39.75
VIT_04s0044g01460.t01	Wine grape	cytosol	39.84	38.35
KRH40934	Soybean	cytosol	36.2	35.82
Solyc05g056500.1.1	Tomato	cytosol	36.46	34.91
KRH53906	Soybean	cytosol	35.68	34.77
KRH59579	Soybean	cytosol	33.59	34.49
PGSC0003DMT400060272	Potato	cytosol	36.2	34.41
KRH64033	Soybean	cytosol	35.16	34.35
TraesCS3B01G409400.1	Wheat	cytosol	29.43	27.1
TraesCS6B01G268300.1	Wheat	extracellular	26.56	25.06
TraesCS4B01G236200.1	Wheat	cytosol	29.95	25.05
TraesCS2B01G601300.1	Wheat	cytosol	27.6	24.82
TraesCS6B01G421400.1	Wheat	cytosol	27.08	24.76
TraesCS6B01G421900.1	Wheat	cytosol	26.82	24.52
TraesCS6B01G420600.1	Wheat	cytosol	26.56	24.29
TraesCS2B01G315100.1	Wheat	cytosol	27.6	24.04
TraesCS2B01G314500.1	Wheat	cytosol	25.26	22.51
TraesCS6B01G209000.1	Wheat	cytosol	24.74	22.46
TraesCS7B01G105600.1	Wheat	mitochondrion	26.04	22.42
TraesCS6B01G342800.1	Wheat	mitochondrion	26.04	22.03
TraesCS2B01G471900.1	Wheat	cytosol	23.7	21.77
TraesCS4B01G228700.1	Wheat	mitochondrion	24.48	21.36
TraesCS6B01G290700.1	Wheat	cytosol	23.96	21.35
TraesCS1B01G284200.1	Wheat	mitochondrion	23.7	20.09

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.2	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF103	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7B01G300000	EnsemblPlants:TraesCS7B01G300000.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16664	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:537384197..537385351

Molecular Weight (calculated)

40770.4 Da

IEP (calculated)

9.289

GRAVY (calculated)

0.349

Length

384 amino acids

Sequence
(BLAST)

001: MMLIPEVFLC PISLDPMSDP VTLLPTGQTY DRPSIRRWLA AGHRTCPVTM RPLPHHTSGL LAPNRTLKHL IDRWLLLADL ALPTLRDNLL AAAAAAAPES
101: APTVAAVETL RIVRSLSPPG FCALLLRLLM LRSSDDVLAE LALDCLLASP STRELADALQ EKKKLPSSFA FLLRQGSPKI KIGMCRLIHT VGAVAVDAVV
201: SFGRSEPVMG ALAALVRDDT CGGASDAALR AMCSLCASDL ASREAAVAAG AVDALLSYIS SGGSRKRPSS CALWTQALET LELLLVSVDA GRQAMYARPG
301: ATAVLVKMVF MVPSRQDRAG AGGSEHAIRS LLVACRESAA ARVDAINAGL LTRLLLLLQS QCSPRAKANA MALLKLLRAI WARH

Best Arabidopsis Sequence Match ( AT3G19380.1 )
(BLAST)

001: MPRNIEPLDL GIQIPYHFRC PISLELMQDP VTVCTGQTYD RASIESWVSI GNNTTCPVTR APLSDFTLIP NHTLRRLIQE WCVANRSNGV ERIPTPKQPA
101: DPTSVRALLS QASAITGTHV SVRSRAAALR RLRGFARDSD KNRVLIAAHN ATEILIKILF SETTSSELVS ESLALLVMLP ITEPNQFVSI SSDPGRVEFL
201: TRLLFDSSIE TRVNAAALIE IVSTGTKSAD LKGSISNSES VFEGVLDLLR NPISSRRALK IGIKTLFALC SVKSTRHIAI TAGAPEILID RLAADFDRCD
301: TERALATVEL LCRTPEGCAA FGEHALTVPL LVKTILRVSD RATEYAAGAL LALCTAEERW REEAAGAGVV VQLLLMVQSE CTERAKKKAQ KLLKLLRDSW
401: PDYNSFANSD DFGCSSQVVP F

Arabidopsis Description

PUB25U-box domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT79]
SUBAcon: [cytosol,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.