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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 3
  • mitochondrion 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G237900.1 Wheat extracellular 98.28 98.28
TraesCS6A01G256700.1 Wheat extracellular 98.03 98.03
EES06938 Sorghum extracellular 86.49 86.49
Zm00001d050712_P001 Maize extracellular, plastid 84.52 84.11
Os02t0548700-00 Rice cytosol, extracellular, plastid 85.01 82.97
Zm00001d016764_P001 Maize extracellular 82.8 80.62
GSMUA_Achr9P08750_001 Banana cytosol, plasma membrane, plastid 56.76 66.96
GSMUA_Achr1P13220_001 Banana cytosol 62.16 63.89
GSMUA_Achr6P25670_001 Banana cytosol 62.41 59.35
Solyc01g107980.2.1 Tomato cytosol 53.07 52.05
PGSC0003DMT400066588 Potato cytosol 53.07 52.05
KRH50316 Soybean cytosol, plasma membrane, plastid 50.86 50.0
VIT_03s0063g00180.t01 Wine grape cytosol 50.86 49.88
CDY50158 Canola cytosol 50.86 49.64
Bra038205.1-P Field mustard cytosol 50.86 49.64
KRH70657 Soybean cytosol 50.61 49.64
CDX92328 Canola cytosol 51.35 49.41
CDX99233 Canola cytosol, peroxisome, plastid 51.11 49.41
CDX95458 Canola cytosol 50.61 49.4
Bra022415.1-P Field mustard cytosol 50.86 49.05
Bra022417.1-P Field mustard cytosol 50.86 49.05
AT3G19380.1 Thale cress cytosol, golgi, plastid 49.88 48.22
Bra014206.1-P Field mustard cytosol 49.63 47.75
CDY16513 Canola cytosol 49.63 47.75
CDY59286 Canola cytosol 49.63 47.75
AT1G49780.1 Thale cress cytoskeleton, cytosol, vacuole 48.89 47.27
TraesCS2B01G323600.1 Wheat cytosol 32.19 32.75
TraesCS7B01G105600.1 Wheat mitochondrion 31.94 29.15
TraesCS3B01G409400.1 Wheat cytosol 29.48 28.78
TraesCS4B01G228700.1 Wheat mitochondrion 30.71 28.41
TraesCS6B01G420600.1 Wheat cytosol 28.5 27.62
TraesCS6B01G421400.1 Wheat cytosol 28.5 27.62
TraesCS2B01G314500.1 Wheat cytosol 28.75 27.15
TraesCS6B01G421900.1 Wheat cytosol 28.01 27.14
TraesCS6B01G342800.1 Wheat mitochondrion 30.22 27.09
TraesCS7B01G300000.1 Wheat cytosol, extracellular, nucleus 25.06 26.56
TraesCS2B01G601300.1 Wheat cytosol 27.03 25.76
TraesCS2B01G315100.1 Wheat cytosol 27.03 24.94
TraesCS2B01G471900.1 Wheat cytosol 25.31 24.64
TraesCS6B01G290700.1 Wheat cytosol 25.55 24.13
TraesCS6B01G209000.1 Wheat cytosol 24.82 23.88
TraesCS1B01G284200.1 Wheat mitochondrion 25.55 22.96
TraesCS4B01G236200.1 Wheat cytosol 25.55 22.66
Protein Annotations
Gene3D:1.25.10.10Gene3D:3.30.40.10MapMan:35.1InterPro:ARM-likeInterPro:ARM-type_foldGO:GO:0003674
GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538InterPro:IPR003613InterPro:IPR011989
InterPro:IPR013083PFAM:PF04564PFscan:PS51698PANTHER:PTHR22849PANTHER:PTHR22849:SF56SMART:SM00504
SUPFAM:SSF48371SUPFAM:SSF57850EnsemblPlantsGene:TraesCS6B01G268300EnsemblPlants:TraesCS6B01G268300.1InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHD
TIGR:cd16664SEG:seg::::
Description
No Description!
Coordinates
chr6B:+:482470908..482472530
Molecular Weight (calculated)
42425.5 Da
IEP (calculated)
8.134
GRAVY (calculated)
0.173
Length
407 amino acids
Sequence
(BLAST)
001: MPGSVPLALG LDTIGLQVPW YFRCPISLEL MQDPVTVATG QTYDRASIES WVATGNTTCP VTRAPLADFT LIPNHTLRRL IQEWCVAHRS LGVERIPTPK
101: QPADPDLIRS LIAQGPALPV LRKLRALARE SDKNRLVMAT HETRAALVEM AFGGSAEEAQ AEAMAVLALV GMGEAEAVDV VGREDRVTRL GKVLGSQATT
201: LEAKVNAGAV VEAAAAASGA EARVVLGAAD GVIEGLVALV DEKANARAVR VGIRGLFALC LAKENRQRAV SAGAASALAR RVAEGGCTGE LERALAAVER
301: LSRTEGGREA VVSGAGGGAA VVIALVRAMS GRAAEHAAGA LVAVVGGSEV LQLEAVRAGA MSQLLMMVQG GCSERAKRKA QHLLKLLRSA WPTTDSMANS
401: ADFLQPY
Best Arabidopsis Sequence Match ( AT3G19380.1 )
(BLAST)
001: MPRNIEPLDL GIQIPYHFRC PISLELMQDP VTVCTGQTYD RASIESWVSI GNNTTCPVTR APLSDFTLIP NHTLRRLIQE WCVANRSNGV ERIPTPKQPA
101: DPTSVRALLS QASAITGTHV SVRSRAAALR RLRGFARDSD KNRVLIAAHN ATEILIKILF SETTSSELVS ESLALLVMLP ITEPNQFVSI SSDPGRVEFL
201: TRLLFDSSIE TRVNAAALIE IVSTGTKSAD LKGSISNSES VFEGVLDLLR NPISSRRALK IGIKTLFALC SVKSTRHIAI TAGAPEILID RLAADFDRCD
301: TERALATVEL LCRTPEGCAA FGEHALTVPL LVKTILRVSD RATEYAAGAL LALCTAEERW REEAAGAGVV VQLLLMVQSE CTERAKKKAQ KLLKLLRDSW
401: PDYNSFANSD DFGCSSQVVP F
Arabidopsis Description
PUB25U-box domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT79]
SUBAcon: [golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.