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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular

Predictor Summary:
  • plastid 3
  • extracellular 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plastid
Any Predictor:extracellular, mitochondrion, plastid
iPSORT:plastid
MultiLoc:extracellular
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016764_P001 Maize extracellular 90.71 88.76
TraesCS6B01G268300.1 Wheat extracellular 84.11 84.52
TraesCS6A01G256700.1 Wheat extracellular 83.86 84.28
TraesCS6D01G237900.1 Wheat extracellular 83.86 84.28
Os02t0548700-00 Rice cytosol, extracellular, plastid 85.82 84.17
GSMUA_Achr9P08750_001 Banana cytosol, plasma membrane, plastid 56.48 66.96
GSMUA_Achr1P13220_001 Banana cytosol 62.1 64.14
GSMUA_Achr6P25670_001 Banana cytosol 63.33 60.51
PGSC0003DMT400066588 Potato cytosol 53.3 52.53
Solyc01g107980.2.1 Tomato cytosol 52.81 52.05
VIT_03s0063g00180.t01 Wine grape cytosol 52.32 51.57
KRH50316 Soybean cytosol, plasma membrane, plastid 52.08 51.45
Bra038205.1-P Field mustard cytosol 51.59 50.6
CDY50158 Canola cytosol 51.59 50.6
CDX95458 Canola cytosol 51.34 50.36
CDX99233 Canola cytosol, peroxisome, plastid 51.83 50.36
KRH70657 Soybean cytosol 50.86 50.12
Bra022415.1-P Field mustard cytosol 50.86 49.29
Bra022417.1-P Field mustard cytosol 50.86 49.29
CDX92328 Canola cytosol 50.86 49.17
AT3G19380.1 Thale cress cytosol, golgi, plastid 50.37 48.93
CDY16513 Canola cytosol 50.37 48.7
Bra014206.1-P Field mustard cytosol 50.37 48.7
CDY59286 Canola cytosol 50.12 48.46
AT1G49780.1 Thale cress cytoskeleton, cytosol, vacuole 49.14 47.74
Zm00001d019807_P001 Maize extracellular 9.54 41.49
Zm00001d044734_P001 Maize mitochondrion 33.5 31.0
Zm00001d028374_P001 Maize mitochondrion 33.01 30.2
Zm00001d003745_P001 Maize nucleus 33.01 30.13
Zm00001d001769_P001 Maize cytosol, endoplasmic reticulum, peroxisome 28.61 29.85
Zm00001d003624_P001 Maize cytosol 29.1 29.75
Zm00001d042738_P001 Maize cytosol 29.1 29.17
Zm00001d016730_P001 Maize cytosol 30.81 28.9
Zm00001d017976_P001 Maize mitochondrion 31.78 28.76
Zm00001d030251_P001 Maize cytosol 29.83 27.48
Zm00001d050689_P001 Maize cytosol 28.61 27.27
Zm00001d026040_P001 Maize cytosol 26.89 26.89
Zm00001d025379_P001 Maize cytosol, mitochondrion, peroxisome, plastid 29.1 26.8
Zm00001d016719_P001 Maize cytosol 27.38 26.11
Zm00001d002498_P001 Maize cytosol 26.41 26.02
Zm00001d017671_P001 Maize cytosol 26.41 25.41
Zm00001d038280_P001 Maize cytosol 27.38 24.78
Zm00001d048008_P001 Maize cytosol 27.63 24.41
Zm00001d028294_P001 Maize cytosol 27.38 24.4
Zm00001d000044_P001 Maize cytosol 12.22 21.64
Zm00001d023480_P001 Maize cytosol 25.43 18.6
Protein Annotations
Gene3D:1.25.10.10Gene3D:3.30.40.10MapMan:35.1UniProt:A0A1D6Q2Y9ProteinID:AQK52946.1InterPro:ARM-like
InterPro:ARM-type_foldGO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538
InterPro:IPR003613InterPro:IPR011989InterPro:IPR013083PFAM:PF04564PFscan:PS51698PANTHER:PTHR22849
PANTHER:PTHR22849:SF56SMART:SM00504SUPFAM:SSF48371SUPFAM:SSF57850UniParc:UPI0008441506InterPro:Ubox_domain
EnsemblPlantsGene:Zm00001d050712EnsemblPlants:Zm00001d050712_P001EnsemblPlants:Zm00001d050712_T001InterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
U-box domain-containing protein 26
Coordinates
chr4:-:117596722..117597951
Molecular Weight (calculated)
42288.0 Da
IEP (calculated)
7.448
GRAVY (calculated)
0.126
Length
409 amino acids
Sequence
(BLAST)
001: MPASVPLCLG LDTAGVQVPW YFRCPISLEL MRDPVTVSTG QTYDRSSIES WVATGNTSCP VTRAPLADFT LIPNHTLRRL IQEWCVAHRS MGVERIPTPK
101: QPADPDLVRS LVAQGPGLPA LRRLRALARE SDKNRLVMAT HETRAALLEA AFGSGSGAAS EELEAEAMAV LALVGLGEEE AVEVVGREER VARLGKVLAG
201: GGSLEARVNA GAVVEAAALA SGADARAVLG AAEGVMAGLV TLVEEKASAR AVRVGIRGLF ALCLAKENRP RAVAAGAASA LARRVAEGGA GEPERALAAV
301: ERLCHAEGGR DGVVAGAGGG PAAVTALVRA MSGRAAEHAA GALVAVVGGS EALQVEAVRA GAMGQLLMMV QGGCSERAKR KAQHLLKLLR SAWPTTDCTA
401: NSDDFLQHY
Best Arabidopsis Sequence Match ( AT3G19380.1 )
(BLAST)
001: MPRNIEPLDL GIQIPYHFRC PISLELMQDP VTVCTGQTYD RASIESWVSI GNNTTCPVTR APLSDFTLIP NHTLRRLIQE WCVANRSNGV ERIPTPKQPA
101: DPTSVRALLS QASAITGTHV SVRSRAAALR RLRGFARDSD KNRVLIAAHN ATEILIKILF SETTSSELVS ESLALLVMLP ITEPNQFVSI SSDPGRVEFL
201: TRLLFDSSIE TRVNAAALIE IVSTGTKSAD LKGSISNSES VFEGVLDLLR NPISSRRALK IGIKTLFALC SVKSTRHIAI TAGAPEILID RLAADFDRCD
301: TERALATVEL LCRTPEGCAA FGEHALTVPL LVKTILRVSD RATEYAAGAL LALCTAEERW REEAAGAGVV VQLLLMVQSE CTERAKKKAQ KLLKLLRDSW
401: PDYNSFANSD DFGCSSQVVP F
Arabidopsis Description
PUB25U-box domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT79]
SUBAcon: [golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.