Factsheet for Zm00001d044734_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19704	Sorghum	mitochondrion	91.4	88.02
Os06t0248500-00	Rice	mitochondrion	78.73	76.82
TraesCS7B01G105600.1	Wheat	mitochondrion	77.38	76.68
TraesCS7D01G201600.1	Wheat	mitochondrion	76.47	76.47
HORVU7Hr1G040790.2	Barley	plastid	78.73	71.31
Zm00001d017976_P001	Maize	mitochondrion	65.84	64.38
TraesCS5A01G088600.1	Wheat	cytosol	43.67	56.43
GSMUA_Achr6P02470_001	Banana	mitochondrion	45.02	52.37
GSMUA_Achr7P18640_001	Banana	mitochondrion	44.8	52.24
GSMUA_Achr6P11310_001	Banana	cytosol	44.34	51.58
Zm00001d028374_P001	Maize	mitochondrion	51.36	50.78
GSMUA_Achr11P...	Banana	mitochondrion	46.83	48.71
GSMUA_Achr10P...	Banana	cytosol	41.18	48.4
Zm00001d030251_P001	Maize	cytosol	45.25	45.05
GSMUA_Achr3P02030_001	Banana	plastid	42.31	44.63
VIT_01s0011g06140.t01	Wine grape	mitochondrion	44.57	44.57
KRH48691	Soybean	cytosol	41.18	41.65
KRH39018	Soybean	mitochondrion	40.72	41.1
KRG97963	Soybean	mitochondrion	39.82	40.84
KRH30918	Soybean	mitochondrion	40.05	40.69
KRH17309	Soybean	cytosol, mitochondrion	40.05	40.32
KRH72959	Soybean	cytosol, mitochondrion	39.82	40.18
Solyc01g005160.2.1	Tomato	mitochondrion	40.05	39.33
PGSC0003DMT400058621	Potato	cytosol, mitochondrion	40.05	39.25
Solyc04g008100.1.1	Tomato	cytosol	37.56	37.56
Solyc11g006030.1.1	Tomato	cytosol	35.75	36.74
PGSC0003DMT400075778	Potato	mitochondrion	36.65	36.65
PGSC0003DMT400073836	Potato	cytosol	34.62	36.52
CDY16432	Canola	cytosol	34.84	35.98
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	35.29	35.86
Bra025442.1-P	Field mustard	mitochondrion	35.52	35.84
Bra039752.1-P	Field mustard	cytosol	33.94	35.55
CDY27655	Canola	mitochondrion	35.07	35.39
CDX99694	Canola	mitochondrion	34.84	35.16
CDY50319	Canola	cytosol	33.94	35.13
Zm00001d019807_P001	Maize	extracellular	7.47	35.11
Zm00001d001769_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	30.54	34.44
Bra001067.1-P	Field mustard	mitochondrion	28.05	33.7
CDX92016	Canola	mitochondrion	28.05	33.7
Zm00001d050712_P001	Maize	extracellular, plastid	31.0	33.5
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	27.83	33.42
AT3G02840.1	Thale cress	mitochondrion	28.51	33.25
AT1G66160.1	Thale cress	cytosol	32.35	33.18
Zm00001d016764_P001	Maize	extracellular	31.0	32.78
Bra040605.1-P	Field mustard	mitochondrion	27.6	32.53
CDY28714	Canola	mitochondrion	27.6	32.53
CDY51529	Canola	mitochondrion	27.38	32.27
Zm00001d042738_P001	Maize	cytosol	29.64	32.11
Zm00001d016730_P001	Maize	cytosol	30.54	30.96
Zm00001d003745_P001	Maize	nucleus	29.41	29.02
Zm00001d003624_P001	Maize	cytosol	26.24	29.0
Zm00001d016719_P001	Maize	cytosol	27.6	28.44
Zm00001d050689_P001	Maize	cytosol	27.6	28.44
Zm00001d026040_P001	Maize	cytosol	25.79	27.87
Zm00001d002498_P001	Maize	cytosol	25.79	27.47
Zm00001d025379_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	27.15	27.03
Zm00001d028294_P001	Maize	cytosol	26.7	25.71
Zm00001d017671_P001	Maize	cytosol	24.21	25.18
Zm00001d048008_P001	Maize	cytosol	26.24	25.05
Zm00001d038280_P001	Maize	cytosol	23.98	23.45
Zm00001d000044_P001	Maize	cytosol	11.54	22.08
Zm00001d023480_P001	Maize	cytosol	26.47	20.93

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1D6NR05	ProteinID:AQL00747.1	InterPro:ARM-like
InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849
PANTHER:PTHR22849:SF16	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0008442CCB	InterPro:Ubox_domain
EnsemblPlantsGene:Zm00001d044734	EnsemblPlants:Zm00001d044734_P001	EnsemblPlants:Zm00001d044734_T001	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

U-box domain-containing protein 21

Coordinates

chr9:-:742710..744038

Molecular Weight (calculated)

45710.5 Da

IEP (calculated)

9.285

GRAVY (calculated)

0.265

Length

442 amino acids

Sequence
(BLAST)

001: MVLAMSRAAR AASRLVPEIP MLRRSSKQAA AAAEEVAVPA QFVCPISLDL MRDPVTAPTG ITYDRESVEG WLARGNARCP VTGRPLRLAD LVPNHATRRM
101: IQDWCVANRA SGVELVRTPK VPLSDAAAAE AVATVSAAAR RGDAAACGAA AARARALGKE SDRNRRSLVA AGAARALAAA FGRLAGERAG ALGDVLAALT
201: VFFPLDDEAR RCIASPASLK SLVSAMSHGE LPARAGAAVV LREVASSADA HTLEAVLRTP GMCDALVDLV RNPVSTQATK AALVTAYYLA AASDRAAARL
301: AECGAVSVLV EALVDADKGT SEKALAALDG VLCADAGLAA ARAHALAVPV LVKKMFRVSD MATDFAVSAL WRLCRAGDAA AAACRAEALR VGAFQKLLLL
401: LQVGCGGVTK ERASELLKML NGSKGSVECV ETVDFKGLKR PF

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.