CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30918	Soybean	mitochondrion	92.34	91.49
KRH72959	Soybean	cytosol, mitochondrion	65.89	64.84
KRH17309	Soybean	cytosol, mitochondrion	65.43	64.24
KRH39018	Soybean	mitochondrion	49.42	48.63
PGSC0003DMT400073836	Potato	cytosol	46.87	48.21
KRH48691	Soybean	cytosol	48.72	48.05
GSMUA_Achr10P...	Banana	cytosol	41.3	47.34
Solyc11g006030.1.1	Tomato	cytosol	46.64	46.74
CDY16432	Canola	cytosol	46.4	46.73
GSMUA_Achr6P11310_001	Banana	cytosol	40.84	46.32
Bra039752.1-P	Field mustard	cytosol	45.24	46.21
CDY50319	Canola	cytosol	45.71	46.14
GSMUA_Achr11P...	Banana	mitochondrion	45.01	45.65
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	45.94	45.52
GSMUA_Achr7P18640_001	Banana	mitochondrion	39.68	45.12
AT1G66160.1	Thale cress	cytosol	45.01	45.01
Bra025442.1-P	Field mustard	mitochondrion	45.71	44.98
CDY27655	Canola	mitochondrion	45.48	44.75
CDX99694	Canola	mitochondrion	45.24	44.52
GSMUA_Achr6P02470_001	Banana	mitochondrion	39.21	44.47
GSMUA_Achr3P02030_001	Banana	plastid	39.91	41.05
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	35.03	41.03
TraesCS6A01G312600.1	Wheat	mitochondrion	42.92	40.66
TraesCS6D01G292200.1	Wheat	mitochondrion	42.69	40.53
TraesCS6B01G342800.1	Wheat	mitochondrion	42.46	40.31
TraesCS7D01G201600.1	Wheat	mitochondrion	41.3	40.27
TraesCS4B01G228700.1	Wheat	mitochondrion	41.07	40.23
Os03t0240600-01	Rice	plastid	41.53	40.22
CDX92016	Canola	mitochondrion	34.34	40.22
Zm00001d017976_P001	Maize	mitochondrion	42.0	40.04
TraesCS4D01G229900.1	Wheat	mitochondrion	40.84	40.0
Os06t0248500-00	Rice	mitochondrion	42.0	39.96
EER92576	Sorghum	mitochondrion	42.0	39.87
Zm00001d044734_P001	Maize	mitochondrion	40.84	39.82
TraesCS7B01G105600.1	Wheat	mitochondrion	41.07	39.69
Bra001067.1-P	Field mustard	mitochondrion	33.87	39.67
KXG19704	Sorghum	mitochondrion	42.23	39.65
HORVU4Hr1G064070.1	Barley	mitochondrion	40.37	39.55
Zm00001d028374_P001	Maize	mitochondrion	40.84	39.37
Os02t0738200-01	Rice	mitochondrion	40.84	38.6
EES05563	Sorghum	mitochondrion	41.07	38.31
AT3G02840.1	Thale cress	mitochondrion	33.64	38.26
CDY28714	Canola	mitochondrion	32.48	37.33
HORVU6Hr1G077120.1	Barley	plastid	43.85	36.91
Bra040605.1-P	Field mustard	mitochondrion	32.02	36.8
CDY51529	Canola	mitochondrion	31.79	36.53
HORVU7Hr1G040790.2	Barley	plastid	41.07	36.27
KRH26691	Soybean	cytosol	31.32	34.88
KRH22633	Soybean	cytosol, nucleus	32.02	34.24
KRH72180	Soybean	cytosol	18.33	34.05
Zm00001d030251_P001	Maize	cytosol	34.11	33.11
TraesCS5A01G088600.1	Wheat	cytosol	25.99	32.75
KRH70657	Soybean	cytosol	30.86	32.05
KRH50316	Soybean	cytosol, plasma membrane, plastid	30.63	31.88
KRG96257	Soybean	cytosol	30.86	31.74
KRH35744	Soybean	cytosol	30.86	31.74
KRH68014	Soybean	cytosol	30.86	31.67
KRG96268	Soybean	cytosol	30.63	31.5
KRH72176	Soybean	cytosol	30.39	31.34
KRH32856	Soybean	cytosol	30.16	30.95
KRH68013	Soybean	cytosol	20.88	30.41
KXG38738	Sorghum	plastid	34.34	29.96
KRH25324	Soybean	cytosol	24.59	29.2
KRH26690	Soybean	cytosol	27.84	28.1
KRG88869	Soybean	cytosol	27.15	28.06
KRH22634	Soybean	cytosol	27.38	27.96
KRH25323	Soybean	cytosol	25.06	26.73
KRH59579	Soybean	cytosol	22.97	26.47
KRH64033	Soybean	cytosol	23.67	25.95
KRH53869	Soybean	cytosol	25.06	25.9
KRH53906	Soybean	cytosol	23.67	25.89
KRH40934	Soybean	cytosol	23.2	25.77
KRH55660	Soybean	cytosol	7.19	24.8
KRH43397	Soybean	cytosol	23.9	24.64
KRH36899	Soybean	cytosol	20.65	23.99
KRH59546	Soybean	cytosol	22.97	23.68
KRH58142	Soybean	cytosol	23.67	22.97
KRH52124	Soybean	cytosol	22.27	22.59
KRH05554	Soybean	cytosol	21.81	22.43
KRH61438	Soybean	cytosol	21.81	22.27
KRH77156	Soybean	cytosol	22.97	22.05
KRG88755	Soybean	cytosol	21.81	21.86
KRH08734	Soybean	mitochondrion	19.03	19.81
KRH70331	Soybean	mitochondrion	18.56	19.66
KRH28330	Soybean	plastid	22.74	19.07

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02010833	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_18G042100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
UniProt:I1MZG3	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRG97963	ProteinID:KRG97963
ProteinID:KRG97963.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI00023DA27A	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:3553145..3554976

Molecular Weight (calculated)

47583.1 Da

IEP (calculated)

7.460

GRAVY (calculated)

0.078

Length

431 amino acids

Sequence
(BLAST)

001: MVLSWSRRNV FRRAKKEKSQ TQLEVEVVIP NHFHCPVSLE LMTDPVTLST GITYDRVSIE KWIEGGNRTC PVTNQVLTTF DIIPNHAIRR MIQDWCVENS
101: SYGIDRIPTP RIPISAYEVS DTCTRILSAC QRGDDKRCQE LVGKIKVWSR ESERNKRCIV GAGAGAVLAY AFDCFSSNSI EKHVVLLEEV LEVMTWMVPL
201: GEEGVSKLSS GASLNSLVWF LEGKDLASRQ SAALLLKEVC VQELAKVGEV VEALVKMVRE PIGSTSTKAC LATIFNLVSL AANREGIAQR FVELGLVSLL
301: LEAIVDGEKG VCEKALGVLD CICDCEKGKE VVKSNALALP LVVRKLLRVS PLASGFAVSI LRKICDKREE GILIEALQVG LFQKLLVLLQ VGCDESTKEN
401: ATGLLKLLNG YRNKAECTDS SLNFEHLKKP F

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.