Factsheet for HORVU4Hr1G064070.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G229900.1	Wheat	mitochondrion	94.55	94.55
TraesCS4B01G228700.1	Wheat	mitochondrion	93.41	93.41
Os03t0240600-01	Rice	plastid	78.64	77.75
EER92576	Sorghum	mitochondrion	80.0	77.53
Zm00001d028374_P001	Maize	mitochondrion	78.41	77.18
HORVU2Hr1G123130.1	Barley	cytosol	6.14	58.7
GSMUA_Achr6P11310_001	Banana	cytosol	45.91	53.16
GSMUA_Achr11P...	Banana	mitochondrion	50.0	51.76
GSMUA_Achr10P...	Banana	cytosol	42.95	50.27
GSMUA_Achr7P18640_001	Banana	mitochondrion	42.73	49.6
GSMUA_Achr6P02470_001	Banana	mitochondrion	42.5	49.21
VIT_01s0011g06140.t01	Wine grape	mitochondrion	48.41	48.19
HORVU7Hr1G040790.2	Barley	plastid	51.59	46.52
GSMUA_Achr3P02030_001	Banana	plastid	42.27	44.39
HORVU6Hr1G077120.1	Barley	plastid	50.45	43.36
KRH48691	Soybean	cytosol	42.5	42.79
PGSC0003DMT400058621	Potato	cytosol, mitochondrion	43.18	42.13
Solyc04g008100.1.1	Tomato	cytosol	41.82	41.63
KRH39018	Soybean	mitochondrion	41.36	41.55
Solyc01g005160.2.1	Tomato	mitochondrion	42.27	41.33
KRG97963	Soybean	mitochondrion	39.55	40.37
PGSC0003DMT400075778	Potato	mitochondrion	40.45	40.27
KRH30918	Soybean	mitochondrion	39.77	40.23
PGSC0003DMT400073836	Potato	cytosol	38.18	40.1
KRH17309	Soybean	cytosol, mitochondrion	40.0	40.09
KRH72959	Soybean	cytosol, mitochondrion	39.77	39.95
Solyc11g006030.1.1	Tomato	cytosol	38.41	39.3
CDY16432	Canola	cytosol	36.14	37.15
Bra039752.1-P	Field mustard	cytosol	35.45	36.97
CDY50319	Canola	cytosol	35.68	36.77
AT1G66160.1	Thale cress	cytosol	34.77	35.5
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	34.77	35.17
Bra025442.1-P	Field mustard	mitochondrion	34.09	34.25
CDY27655	Canola	mitochondrion	33.86	34.02
CDX99694	Canola	mitochondrion	33.64	33.79
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	26.59	31.79
CDX92016	Canola	mitochondrion	26.14	31.25
AT3G02840.1	Thale cress	mitochondrion	26.82	31.13
Bra001067.1-P	Field mustard	mitochondrion	25.68	30.71
Bra040605.1-P	Field mustard	mitochondrion	26.14	30.67
CDY51529	Canola	mitochondrion	25.91	30.4
CDY28714	Canola	mitochondrion	25.68	30.13
HORVU3Hr1G083500.1	Barley	cytosol	28.18	30.02
HORVU2Hr1G076490.1	Barley	mitochondrion	5.68	28.74
HORVU6Hr1G089590.1	Barley	plastid	29.32	28.54
HORVU0Hr1G003810.1	Barley	cytosol	27.95	28.54
HORVU6Hr1G089560.1	Barley	plastid	29.09	28.38
HORVU6Hr1G066870.1	Barley	cytosol	27.5	28.21
HORVU6Hr1G034250.1	Barley	cytosol, nucleus, peroxisome	25.68	26.1
HORVU7Hr1G093780.1	Barley	cytosol, endoplasmic reticulum, extracellular	21.82	24.55
HORVU1Hr1G074180.1	Barley	mitochondrion, plastid	24.32	23.62
HORVU4Hr1G066070.1	Barley	cytosol	23.86	22.83
HORVU2Hr1G074130.1	Barley	plastid	24.09	20.46
HORVU2Hr1G123050.1	Barley	cytosol	15.0	19.64

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:AK369095	InterPro:ARM-like	InterPro:ARM-type_fold
UniProt:F2DYX5	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:HORVU4Hr1G064070	EnsemblPlants:HORVU4Hr1G064070.1	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF107	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI00020075B8	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F2DYX5]

Coordinates

chrchr4H:-:536981409..536983117

Molecular Weight (calculated)

46623.7 Da

IEP (calculated)

8.772

GRAVY (calculated)

0.103

Length

440 amino acids

Sequence
(BLAST)

001: MALLARRARR AATKTAAPVA VELSIPGHFR CPISLDLMRD PVTAPTGITY DRESIEAWLD TGRAAVCPVT HAPLRRDDLV PNHAIRRVIQ DWCVANRSRG
101: VERIPTPKIP VTPVQASELL FEVAESARAA DRGAPARCAA AVASVRALAR ESERNRRCFA SIGTGRVLAA ALESLAAGGG DPAGGVLEDV LAALVRMAPL
201: DQEAARILGS PRSLDSLVAI AENGSLAGRL NAVLAIKEVV SSCHGACTDL GGKADDIADA LVKVIKAPIC PQATKAAMVA AYHLARSDER VASRVARTGL
301: VPVLVESLVD ADKSVAEKAL ALLDAVLTSE EGRERARMHA LTVAVLVKKM FRVSDLATEL AVSAMWRLGK NASDDEGAAT KCLVEALRVG AFQKLLLLLQ
401: VGCRDATKEK TTELLRMLNK HKGAGECVDA MDFRGLNKLS

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.