CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51529	Canola	mitochondrion	95.73	95.73
CDX92016	Canola	mitochondrion	81.6	83.15
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	79.47	80.98
AT3G02840.1	Thale cress	mitochondrion	76.27	75.46
KRH72959	Soybean	cytosol, mitochondrion	38.67	33.1
KRG97963	Soybean	mitochondrion	37.33	32.48
PGSC0003DMT400073836	Potato	cytosol	36.27	32.46
KRH30918	Soybean	mitochondrion	37.33	32.18
KRH17309	Soybean	cytosol, mitochondrion	37.07	31.66
Solyc11g006030.1.1	Tomato	cytosol	35.73	31.16
GSMUA_Achr10P...	Banana	cytosol	30.67	30.59
GSMUA_Achr6P11310_001	Banana	cytosol	30.13	29.74
CDY16432	Canola	cytosol	33.87	29.67
CDY50319	Canola	cytosol	33.6	29.51
GSMUA_Achr11P...	Banana	mitochondrion	33.33	29.41
CDY27655	Canola	mitochondrion	34.13	29.22
CDX99694	Canola	mitochondrion	34.13	29.22
GSMUA_Achr6P02470_001	Banana	mitochondrion	28.8	28.42
TraesCS6A01G312600.1	Wheat	mitochondrion	33.6	27.69
Os02t0738200-01	Rice	mitochondrion	33.6	27.63
Zm00001d044734_P001	Maize	mitochondrion	32.53	27.6
Zm00001d017976_P001	Maize	mitochondrion	33.07	27.43
Os06t0248500-00	Rice	mitochondrion	33.07	27.37
TraesCS7B01G105600.1	Wheat	mitochondrion	32.53	27.35
TraesCS6B01G342800.1	Wheat	mitochondrion	33.07	27.31
TraesCS6D01G292200.1	Wheat	mitochondrion	32.8	27.09
TraesCS7D01G201600.1	Wheat	mitochondrion	31.47	26.7
EER92576	Sorghum	mitochondrion	32.27	26.65
GSMUA_Achr7P18640_001	Banana	mitochondrion	26.93	26.65
Zm00001d028374_P001	Maize	mitochondrion	31.73	26.62
TraesCS4D01G229900.1	Wheat	mitochondrion	31.2	26.59
GSMUA_Achr3P02030_001	Banana	plastid	29.07	26.01
EES05563	Sorghum	mitochondrion	32.0	25.97
KXG19704	Sorghum	mitochondrion	31.47	25.71
HORVU4Hr1G064070.1	Barley	mitochondrion	30.13	25.68
TraesCS4B01G228700.1	Wheat	mitochondrion	29.87	25.45
Os03t0240600-01	Rice	plastid	30.13	25.39
HORVU7Hr1G040790.2	Barley	plastid	32.0	24.59
HORVU6Hr1G077120.1	Barley	plastid	33.07	24.22
Zm00001d030251_P001	Maize	cytosol	27.47	23.2
CDY23218	Canola	cytosol	24.27	22.98
CDY59599	Canola	cytosol	24.53	22.49
CDX95337	Canola	cytosol	24.53	22.49
CDX78096	Canola	cytosol	22.67	21.85
KXG38738	Sorghum	plastid	28.53	21.66
CDX79645	Canola	cytosol	23.47	21.57
CDX84587	Canola	cytosol	23.47	21.52
CDX75084	Canola	cytosol	23.2	21.43
CDX84168	Canola	cytosol	23.2	21.43
CDY40422	Canola	cytosol	23.47	21.36
CDY32070	Canola	cytosol	23.2	21.12
CDX99233	Canola	cytosol, peroxisome, plastid	22.93	20.43
CDX92328	Canola	cytosol	22.67	20.09
CDX92262	Canola	cytosol	21.87	19.85
CDY50158	Canola	cytosol	21.87	19.66
CDX95458	Canola	cytosol	21.87	19.66
TraesCS5A01G088600.1	Wheat	cytosol	17.87	19.59
CDX99325	Canola	cytosol	21.6	19.15
CDX75980	Canola	cytosol	21.6	19.1
CDX82332	Canola	cytosol	21.6	19.1
CDX84538	Canola	cytosol	21.33	19.09
CDY47911	Canola	cytosol	21.33	18.96
CDY01063	Canola	cytosol	22.13	18.86
CDY08864	Canola	cytosol	21.07	18.85
CDY16513	Canola	cytosol	21.07	18.68
CDY53920	Canola	cytosol	21.6	18.58
CDY08490	Canola	cytosol	21.87	18.55
CDY59286	Canola	cytosol	20.8	18.44
CDY67531	Canola	cytosol	21.87	18.34
CDY53333	Canola	cytosol	21.6	18.12
CDX83098	Canola	cytosol	21.33	18.06
CDX73849	Canola	cytosol	22.13	17.77
CDY69247	Canola	cytosol	20.8	17.61
CDY18670	Canola	cytosol	20.53	17.38
CDY71041	Canola	cytosol	18.4	16.71

Protein Annotations

EnsemblPlants:CDY28714	EnsemblPlantsGene:GSBRNA2T00041351001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	ncoils:Coil	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61	ProteinID:CDY28714
ProteinID:CDY28714.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI0004EE4E7A	UniProt:A0A078GU50	MapMan:35.1

Description

BnaCnng06000DBnaCnng06000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU50]

Coordinates

chrLK032225:+:330506..331633

Molecular Weight (calculated)

41962.2 Da

IEP (calculated)

8.970

GRAVY (calculated)

-0.085

Length

375 amino acids

Sequence
(BLAST)

001: MVLPWRSRGG RRAERRNLST PGDTSVVKIK VPAQLRSSKI ELVQSPRAPL TPRDAVEICR RLENATAREE NAECLEIVSK IKNLARDNGE TNKKCLLQYG
101: VVSELTSCFQ RFASTREEHA RLLEEVLSVI TSWLPLSRTE GFSKMGSTAS LNTLVSFLNA PDAKTRQNAL FIIREVIAID KRFVYALTDI EGACEGLIKI
201: IKDSVSTSST KASIMAIYRI ISCDNKTALK LVNLGLVALI AEMIVNNAEK SVCERCLVVL NVVCDNEQSR EDVLGNALIV PLIVKKILRV SDLATQCSVS
301: ILWKLWRKNR EDVLLEALQV GAFEKLLVVL QVGCEEKTKE RASELLRNLN RCRNEMENTN CVDSSMHLKN VKKSF

Best Arabidopsis Sequence Match ( AT3G02840.1 )
(BLAST)

001: MVLPWRSRGG VAKRRNQLIS GDISVVETKI PVQLRSPSRI ERIQSPRVLL TPRDAVEISR RLQNAAAREE YAECLEIVSK IKNLGRGGDT NKKCLVQNGS
101: VLALSSCFER FAAARDGHMR LLEEILFVLS SWLPLNRSEG FNKMGSTASL NCLVRFLNGK DAKTRQNAAF CIREVIAVDK RYVYALTDVE GACEGLVKII
201: RDSVSTSSTK ASLMVIYRAI SSNDKITEKF VKLGLVELIT EMMVNNAEKS VCERSLVVLN ATCDNEQGKE DVLRNALIVP LLVKKILRVS DLATQCSVSI
301: LWKLWKNKKD GECDDRLLVE ALQVGAFEKL LVLLQVGCED KTKEKASELL RNLNRCRNEI EKTNCVDSSM HLKNVKKSF

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M8S5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.