CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72959	Soybean	cytosol, mitochondrion	92.94	93.15
KRH30918	Soybean	mitochondrion	65.38	65.98
KRG97963	Soybean	mitochondrion	64.24	65.43
KRH39018	Soybean	mitochondrion	49.66	49.77
KRH48691	Soybean	cytosol	49.43	49.66
PGSC0003DMT400073836	Potato	cytosol	44.65	46.78
GSMUA_Achr11P...	Banana	mitochondrion	44.87	46.35
GSMUA_Achr10P...	Banana	cytosol	39.64	46.28
CDY16432	Canola	cytosol	45.1	46.26
GSMUA_Achr6P11310_001	Banana	cytosol	39.86	46.05
Solyc11g006030.1.1	Tomato	cytosol	45.1	46.05
Bra039752.1-P	Field mustard	cytosol	44.19	45.97
AT1G66160.1	Thale cress	cytosol	45.1	45.94
Bra025442.1-P	Field mustard	mitochondrion	45.33	45.43
CDY50319	Canola	cytosol	44.19	45.43
CDX99694	Canola	mitochondrion	45.1	45.21
CDY27655	Canola	mitochondrion	44.87	44.98
GSMUA_Achr7P18640_001	Banana	mitochondrion	38.5	44.59
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	43.51	43.91
TraesCS7D01G201600.1	Wheat	mitochondrion	42.6	42.31
GSMUA_Achr6P02470_001	Banana	mitochondrion	36.45	42.11
Os06t0248500-00	Rice	mitochondrion	43.28	41.94
TraesCS7B01G105600.1	Wheat	mitochondrion	42.6	41.93
Zm00001d017976_P001	Maize	mitochondrion	43.05	41.81
Os03t0240600-01	Rice	plastid	41.91	41.35
TraesCS6D01G292200.1	Wheat	mitochondrion	42.6	41.19
TraesCS6A01G312600.1	Wheat	mitochondrion	42.6	41.1
EER92576	Sorghum	mitochondrion	42.14	40.75
Zm00001d028374_P001	Maize	mitochondrion	41.46	40.72
TraesCS4D01G229900.1	Wheat	mitochondrion	40.77	40.68
TraesCS6B01G342800.1	Wheat	mitochondrion	41.91	40.53
TraesCS4B01G228700.1	Wheat	mitochondrion	40.32	40.23
Zm00001d044734_P001	Maize	mitochondrion	40.32	40.05
EES05563	Sorghum	mitochondrion	42.14	40.04
HORVU4Hr1G064070.1	Barley	mitochondrion	40.09	40.0
Os02t0738200-01	Rice	mitochondrion	41.46	39.91
KXG19704	Sorghum	mitochondrion	41.69	39.87
CDX92016	Canola	mitochondrion	33.26	39.67
AT3G02840.1	Thale cress	mitochondrion	34.17	39.58
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	33.03	39.4
GSMUA_Achr3P02030_001	Banana	plastid	37.59	39.38
HORVU7Hr1G040790.2	Barley	plastid	42.6	38.32
Bra001067.1-P	Field mustard	mitochondrion	32.12	38.32
CDY28714	Canola	mitochondrion	31.66	37.07
HORVU6Hr1G077120.1	Barley	plastid	43.05	36.91
Bra040605.1-P	Field mustard	mitochondrion	31.44	36.8
CDY51529	Canola	mitochondrion	31.44	36.8
Zm00001d030251_P001	Maize	cytosol	34.4	34.01
TraesCS5A01G088600.1	Wheat	cytosol	26.42	33.92
KRG96257	Soybean	cytosol	32.35	33.89
KRG96268	Soybean	cytosol	32.12	33.65
KRH35744	Soybean	cytosol	31.89	33.41
KRH68014	Soybean	cytosol	31.66	33.1
KRH72176	Soybean	cytosol	30.75	32.3
KRH32856	Soybean	cytosol	30.52	31.9
KRH72180	Soybean	cytosol	16.86	31.9
KRH26691	Soybean	cytosol	27.79	31.52
KRH50316	Soybean	cytosol, plasma membrane, plastid	29.39	31.16
KRH70657	Soybean	cytosol	29.39	31.08
KRH22633	Soybean	cytosol, nucleus	28.47	31.02
KXG38738	Sorghum	plastid	33.49	29.76
KRH68013	Soybean	cytosol	18.22	27.03
KRH25324	Soybean	cytosol	21.87	26.45
KRG88869	Soybean	cytosol	24.37	25.66
KRH26690	Soybean	cytosol	24.83	25.53
KRH22634	Soybean	cytosol	24.37	25.36
KRH25323	Soybean	cytosol	23.23	25.25
KRH59579	Soybean	cytosol	21.18	24.87
KRH59546	Soybean	cytosol	23.23	24.4
KRH53869	Soybean	cytosol	23.01	24.22
KRH43397	Soybean	cytosol	22.78	23.92
KRH40934	Soybean	cytosol	20.96	23.71
KRH64033	Soybean	cytosol	21.18	23.66
KRH58142	Soybean	cytosol	23.92	23.65
KRH53906	Soybean	cytosol	21.18	23.6
KRH52124	Soybean	cytosol	22.78	23.53
KRH77156	Soybean	cytosol	23.92	23.39
KRH55660	Soybean	cytosol	6.61	23.2
KRH05554	Soybean	cytosol	22.1	23.15
KRH61438	Soybean	cytosol	22.1	22.99
KRH36899	Soybean	cytosol	19.36	22.91
KRG88755	Soybean	cytosol	22.1	22.56
KRH08734	Soybean	mitochondrion	21.18	22.46
KRH70331	Soybean	mitochondrion	19.59	21.13
KRH28330	Soybean	plastid	24.15	20.62

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100795913	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02009080	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_14G212200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	UniProt:I1MBT5	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRH17309
ProteinID:KRH17309	ProteinID:KRH17309.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000233B6FF	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:47742907..47744519

Molecular Weight (calculated)

48631.7 Da

IEP (calculated)

8.071

GRAVY (calculated)

0.026

Length

439 amino acids

Sequence
(BLAST)

001: MVLSWTKGRV FRRARKGKEL KYSGGDMEIE IAIPTHFRCP VTLDMMKDPV TVSTGITYDR DSIEKWIESG NRTCPVTKTE LTSLDDMIPN HAIRRMIQDW
101: CVEHRSHGIE RIPTPRIPVT PYEVADTCTR ILSAAQHGDE NKCVELVRKI KAWGKESERN KRCIVANGAA LALSNAFNSF SSRGLLIEKN VVVLDEILGA
201: LVWMRPLSEE GRSVLGSTSS ISCMVWFMNG KQLSTRQNAA LVLKEMHVEA LVKCVDVVEA LVNMIKEPVG NGSTKPCLST IFNLVSYSSV RGVTCERFVE
301: LGLVDAVLEV LVDAERGVCE KALGVLDCVC DCKQGVQMAK ANALTLPLVI KKLLRVSELS SSFAVSVLWK LFCDKNEEGV LIEALQMGVF HKLLVLLQVG
401: CGEGTKEKAT ELLKLLNGCR SKAECVDSSL DFKHLKKPF

Best Arabidopsis Sequence Match ( AT1G66160.1 )
(BLAST)

001: MGLSLRVRRR GGSVSKKEII PVTSCSEEVE ITIPSQFQCP ISYELMKDPV IIASGITYDR ENIEKWFESG YQTCPVTNTV LTSLEQIPNH TIRRMIQGWC
101: GSSLGGGIER IPTPRVPVTS HQVSEICERL SAATRRGDYA ACMEMVTKMT RLGKESERNR KCVKENGAGL VLCVCFDAFS ENANASLLLE ETVSVLTWML
201: PIGLEGQSKL TTTSSFNRLV ELLRNGDQNA AFLIKELLEL NVTHVHALTK INGVQEAFMK SINRDSTCVN SLISIHHMIL TNQETVSRFL ELDLVNITVE
301: MLVDSENSVC EKALTVLNVI CETKEGREKV RRNKLVIPIL VKKILKISEK KDLVSVMWKV CKSGDGSEVE EALRLGAFKK LVVMLQVGCG EGTKEKVTEL
401: LKMMNKVMKM NGFVDRSYSS SIEFKHVKKP F

Arabidopsis Description

PUB20U-box domain-containing protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8D1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.