CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72180	Soybean	cytosol	50.68	64.66
VIT_08s0105g00200.t01	Wine grape	cytosol	55.41	40.39
Solyc01g007050.1.1	Tomato	cytosol	46.96	33.02
PGSC0003DMT400054946	Potato	cytosol	46.62	32.78
GSMUA_Achr11P...	Banana	cytosol	40.2	32.51
KRG88869	Soybean	cytosol	45.61	32.37
KRH25323	Soybean	cytosol	43.92	32.18
KRH26691	Soybean	cytosol	41.89	32.04
CDY47911	Canola	cytosol	45.61	31.99
KRH22634	Soybean	cytosol	45.61	31.99
KRH26690	Soybean	cytosol	45.95	31.85
KRH22633	Soybean	cytosol, nucleus	42.23	31.02
CDY01063	Canola	cytosol	45.61	30.68
CDY08490	Canola	cytosol	45.27	30.32
KRH68014	Soybean	cytosol	42.91	30.24
CDY67531	Canola	cytosol	45.61	30.2
KRG96257	Soybean	cytosol	42.57	30.07
KRH35744	Soybean	cytosol	42.57	30.07
Bra038683.1-P	Field mustard	cytosol	45.27	29.98
KRG96268	Soybean	cytosol	42.23	29.83
CDY53920	Canola	cytosol	43.24	29.36
Bra034806.1-P	Field mustard	cytosol	46.28	29.34
KRH72176	Soybean	cytosol	40.88	28.95
AT3G11840.1	Thale cress	cytosol	44.26	28.73
KRH32856	Soybean	cytosol	39.86	28.1
CDX73849	Canola	cytosol	43.58	27.62
Bra001424.1-P	Field mustard	cytosol	43.58	27.56
KRH25324	Soybean	cytosol	33.78	27.55
KRH55660	Soybean	cytosol	11.15	26.4
KRH48691	Soybean	cytosol	31.76	21.51
KRH39018	Soybean	mitochondrion	31.76	21.46
KRG97963	Soybean	mitochondrion	30.41	20.88
KRH30918	Soybean	mitochondrion	30.41	20.69
KRH50316	Soybean	cytosol, plasma membrane, plastid	28.72	20.53
KRH70657	Soybean	cytosol	28.38	20.24
KRH64033	Soybean	cytosol	25.68	19.34
KRH53906	Soybean	cytosol	25.68	19.29
KRH53869	Soybean	cytosol	27.03	19.18
KRH08734	Soybean	mitochondrion	26.01	18.6
KRH70331	Soybean	mitochondrion	25.34	18.43
KRH17309	Soybean	cytosol, mitochondrion	27.03	18.22
KRH72959	Soybean	cytosol, mitochondrion	26.69	18.04
KRH40934	Soybean	cytosol	23.31	17.78
KRH59546	Soybean	cytosol	25.0	17.7
KRH43397	Soybean	cytosol	25.0	17.7
KRH59579	Soybean	cytosol	21.96	17.38
KRH05554	Soybean	cytosol	23.99	16.95
KRH77156	Soybean	cytosol	25.68	16.93
KRH58142	Soybean	cytosol	25.34	16.89
KRH61438	Soybean	cytosol	23.99	16.82
KRH52124	Soybean	cytosol	23.99	16.71
KRG88755	Soybean	cytosol	23.99	16.51
KRH36899	Soybean	cytosol	19.93	15.9
KRH28330	Soybean	plastid	26.01	14.98

Protein Annotations

EntrezGene:100808586	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02002096	InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_03G202500
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	UniProt:I1JQ94
InterPro:IPR003613	InterPro:IPR013083	EnsemblPlants:KRH68013	ProteinID:KRH68013	ProteinID:KRH68013.1	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF24	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI00023372A3	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:41089090..41089980

Molecular Weight (calculated)

33778.7 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.043

Length

296 amino acids

Sequence
(BLAST)

001: MDEIEVPKYF ICPISLQIMK DPVTTITGIT YDRDSIEHWL FTNKSTTCPI TRQPLPKHSD LTPNHTLLRL IQFWCTQNCI HRVPTPKPPL NKLQVLKLLK
101: DIKDPNLQLK TIKELKLLAT RNERNNINKC LLLQAGVPKA MILFMLTCFR KSQFDKALEE ALSLLQLVDV PEEEIKLLLA EKNDQILDSL TRVLGSDEME
201: NSIAVKSHAL MLLNTFMQEA SSSVMESGTN QQDTKAAFHA MLIACHWGRN RIMMVESGAV FELIEIELLT PEKRTTELTM EILFRLCSCA EVSLLC

Best Arabidopsis Sequence Match ( AT2G35930.1 )
(BLAST)

001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C

Arabidopsis Description

PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.