Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH68013 | Soybean | cytosol | 64.66 | 50.68 |
VIT_08s0105g00200.t01 | Wine grape | cytosol | 57.76 | 33.0 |
KRH25323 | Soybean | cytosol | 49.57 | 28.47 |
KRG88869 | Soybean | cytosol | 50.86 | 28.3 |
KRH26690 | Soybean | cytosol | 49.14 | 26.7 |
KRH22634 | Soybean | cytosol | 48.28 | 26.54 |
GSMUA_Achr11P... | Banana | cytosol | 41.81 | 26.5 |
Solyc01g007050.1.1 | Tomato | cytosol | 46.98 | 25.89 |
CDY47911 | Canola | cytosol | 46.98 | 25.83 |
KRH68014 | Soybean | cytosol | 46.55 | 25.71 |
PGSC0003DMT400054946 | Potato | cytosol | 46.55 | 25.65 |
KRH55660 | Soybean | cytosol | 13.79 | 25.6 |
KRH35744 | Soybean | cytosol | 46.12 | 25.54 |
KRH26691 | Soybean | cytosol | 42.24 | 25.32 |
CDY53920 | Canola | cytosol | 47.41 | 25.23 |
KRG96257 | Soybean | cytosol | 45.26 | 25.06 |
KRG96268 | Soybean | cytosol | 45.26 | 25.06 |
CDY67531 | Canola | cytosol | 47.84 | 24.83 |
KRH22633 | Soybean | cytosol, nucleus | 43.1 | 24.81 |
CDY01063 | Canola | cytosol | 46.98 | 24.77 |
CDY08490 | Canola | cytosol | 46.98 | 24.66 |
Bra038683.1-P | Field mustard | cytosol | 46.98 | 24.38 |
KRH72176 | Soybean | cytosol | 42.67 | 23.68 |
Bra034806.1-P | Field mustard | cytosol | 47.41 | 23.55 |
CDX73849 | Canola | cytosol | 46.55 | 23.13 |
KRH32856 | Soybean | cytosol | 41.81 | 23.1 |
Bra001424.1-P | Field mustard | cytosol | 46.55 | 23.08 |
AT3G11840.1 | Thale cress | cytosol | 44.4 | 22.59 |
KRH25324 | Soybean | cytosol | 32.33 | 20.66 |
KRH48691 | Soybean | cytosol | 35.78 | 18.99 |
KRH39018 | Soybean | mitochondrion | 35.78 | 18.95 |
KRH30918 | Soybean | mitochondrion | 34.91 | 18.62 |
KRG97963 | Soybean | mitochondrion | 34.05 | 18.33 |
KRH50316 | Soybean | cytosol, plasma membrane, plastid | 32.33 | 18.12 |
KRH70657 | Soybean | cytosol | 31.47 | 17.59 |
KRH17309 | Soybean | cytosol, mitochondrion | 31.9 | 16.86 |
KRH53869 | Soybean | cytosol | 30.17 | 16.79 |
KRH59546 | Soybean | cytosol | 29.74 | 16.51 |
KRH72959 | Soybean | cytosol, mitochondrion | 31.03 | 16.44 |
KRH59579 | Soybean | cytosol | 26.29 | 16.31 |
KRH40934 | Soybean | cytosol | 26.72 | 15.98 |
KRH43397 | Soybean | cytosol | 28.45 | 15.79 |
KRH64033 | Soybean | cytosol | 26.29 | 15.52 |
KRH53906 | Soybean | cytosol | 26.29 | 15.48 |
KRH36899 | Soybean | cytosol | 24.14 | 15.09 |
KRH05554 | Soybean | cytosol | 26.29 | 14.56 |
KRH08734 | Soybean | mitochondrion | 25.86 | 14.49 |
KRH61438 | Soybean | cytosol | 26.29 | 14.46 |
KRG88755 | Soybean | cytosol | 26.29 | 14.19 |
KRH52124 | Soybean | cytosol | 25.86 | 14.12 |
KRH70331 | Soybean | mitochondrion | 24.14 | 13.76 |
KRH58142 | Soybean | cytosol | 26.29 | 13.74 |
KRH77156 | Soybean | cytosol | 25.43 | 13.14 |
KRH28330 | Soybean | plastid | 25.86 | 11.67 |
Protein Annotations
Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A0R0L8N7 | EMBL:ACUP02001178 | EnsemblPlantsGene:GLYMA_02G196300 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR003613 | InterPro:IPR013083 | EnsemblPlants:KRH72180 |
ProteinID:KRH72180 | ProteinID:KRH72180.1 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF24 |
SMART:SM00504 | SUPFAM:SSF57850 | UniParc:UPI0006EDBD5C | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:37188414..37189447
Molecular Weight (calculated)
26227.0 Da
IEP (calculated)
8.485
GRAVY (calculated)
-0.222
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEIEVPQYF ICPISLQIMK DPVTAITGIT YDRESIEQWL FTNKNTTCPV SNQPLPRDSD LTPNHTLRRL IQAWCTQNAS LGIVRIPTPK SPLNKIQVLK
101: LLKDLNDPKS LLQLELLAAE SERNKKCLLE AGVPRAMIMF IVNCYKKGQI QKGLEEALSI LQFVKIPREE CAILLKDNDQ ILDSLAWLLS HDEMENSIAV
201: KSHAVQVLKK SSARTTCVAF SRGSNPRSSK QW
101: LLKDLNDPKS LLQLELLAAE SERNKKCLLE AGVPRAMIMF IVNCYKKGQI QKGLEEALSI LQFVKIPREE CAILLKDNDQ ILDSLAWLLS HDEMENSIAV
201: KSHAVQVLKK SSARTTCVAF SRGSNPRSSK QW
001: MSGGIMDEEI EIPPFFLCPI SLEIMKDPVI VSTGITYDRD SIEKWLFAGK KNSCPVTKQD ITDADLTPNH TLRRLIQSWC TLNASYGVER IPTPRPPICK
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
101: SEIEKLIRDS ASSHENQVKC LKRLRQIVSE NATNKRCLEA AGVPEFLANI VSNDSENGSL TDEALNLLYH LETSETVLKN LLNNKKDNNI VKSLTKIMQR
201: GMYESRVYAT LLLKNILEVA DPMQSMTLKP EVFTEVVQIL DDRISQKATK AAMHILVNIC PWGRNRHKAV EAGVISVIIE LLMDESFTSE RRGPEMAMVV
301: LDLLCQCAEG RAEFLNHGAA IAVVCKKILR VSQTASDRAV RVLLSVGRFC ATPALLHEML QLGVVAKLCL VLQVSCGGKT KEKAKELLKL HARVWKDSPC
401: LPKNMILAYP C
Arabidopsis Description
PUB23E3 ubiquitin-protein ligase PUB23 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.