CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22634	Soybean	cytosol	91.8	92.89
KRH25323	Soybean	cytosol	67.21	71.04
KRG88869	Soybean	cytosol	68.38	70.02
VIT_06s0009g00370.t01	Wine grape	cytosol	58.08	61.23
PGSC0003DMT400038196	Potato	cytosol	51.05	52.15
Solyc01g009320.1.1	Tomato	cytosol	49.88	50.96
GSMUA_Achr11P...	Banana	cytosol	43.09	50.27
Solyc11g068940.1.1	Tomato	cytosol	49.18	49.65
Solyc06g074140.1.1	Tomato	cytosol	48.48	49.29
KRH72180	Soybean	cytosol	26.7	49.14
PGSC0003DMT400015179	Potato	cytosol	44.73	47.39
KRH68013	Soybean	cytosol	31.85	45.95
KRG96257	Soybean	cytosol	44.03	44.87
KRH68014	Soybean	cytosol	44.03	44.76
KRH22633	Soybean	cytosol, nucleus	42.15	44.66
KRG96268	Soybean	cytosol	43.79	44.63
KRH32856	Soybean	cytosol	43.79	44.52
KRH35744	Soybean	cytosol	43.56	44.39
KRH72176	Soybean	cytosol	42.86	43.78
KRH26691	Soybean	cytosol	38.64	42.64
KRH25324	Soybean	cytosol	33.72	39.67
KRH39018	Soybean	mitochondrion	29.27	28.54
KRH48691	Soybean	cytosol	29.04	28.38
KRG97963	Soybean	mitochondrion	28.1	27.84
KRH30918	Soybean	mitochondrion	28.34	27.82
KRH50316	Soybean	cytosol, plasma membrane, plastid	26.0	26.81
KRH70657	Soybean	cytosol	25.76	26.51
KRH53906	Soybean	cytosol	23.65	25.63
KRH64033	Soybean	cytosol	23.42	25.45
KRH72959	Soybean	cytosol, mitochondrion	25.76	25.11
KRH17309	Soybean	cytosol, mitochondrion	25.53	24.83
KRH55660	Soybean	cytosol	7.26	24.8
KRH40934	Soybean	cytosol	22.25	24.48
KRH59579	Soybean	cytosol	20.61	23.53
KRH53869	Soybean	cytosol	22.95	23.5
KRH52124	Soybean	cytosol	22.95	23.06
KRH77156	Soybean	cytosol	24.12	22.94
KRH61438	Soybean	cytosol	22.48	22.75
KRH05554	Soybean	cytosol	22.25	22.67
KRH58142	Soybean	cytosol	23.42	22.52
KRH43397	Soybean	cytosol	22.01	22.49
KRG88755	Soybean	cytosol	22.48	22.33
KRH59546	Soybean	cytosol	21.31	21.77
KRH36899	Soybean	cytosol	18.5	21.29
KRH70331	Soybean	mitochondrion	19.91	20.88
KRH08734	Soybean	mitochondrion	20.14	20.77
KRH28330	Soybean	plastid	24.36	20.23

Protein Annotations

EntrezGene:100787419	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02007743	InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_12G188900
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	UniProt:I1LU00
InterPro:IPR003613	InterPro:IPR013083	EnsemblPlants:KRH26690	ProteinID:KRH26690	ProteinID:KRH26690.1	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF104	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000233D8B8	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:+:35062400..35064065

Molecular Weight (calculated)

48139.0 Da

IEP (calculated)

9.180

GRAVY (calculated)

-0.112

Length

427 amino acids

Sequence
(BLAST)

001: MLYETDYTMT EIEIPQFFLC PISLQIMKDP VTTVTGITYD RESIEKWLLK AKDCTCPITK QPLPRSPEFL TPNHTLRRLI QAWCSANEAN GVDQIPTPKS
101: PLSNSNAEKL VKDLEVSSRF QKALEKLHAL AMENERNRRC MASAGVAEAM VHVITKIFKQ GNKTTPCVEE ALRILRLLWS SANMVDSNNN NNNKIKRMVG
201: ENFDFLNSLT WALQLQTKNN VKLTNEAMPI LKLVIEAKDS TPLGNLKLEF FKVVVSVMKN RELSQQAVKS ALHVLIETCP LGRNRMKIVE AGAVIELIEL
301: ALEKPEKNMT ELVFILLANL CSCADGREQF LQHAAGIAVV SKRILRVSPT TNDRALHIFS LVSKFSASNE VVQEMLRVGA VSKLCMVLQA DCASYLKEKA
401: RGVLRLHSKT WNNSPCIQVY LLTRFHR

Best Arabidopsis Sequence Match ( AT3G11840.1 )
(BLAST)

001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI

Arabidopsis Description

PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.