CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48691	Soybean	cytosol	93.15	93.36
KRH72959	Soybean	cytosol, mitochondrion	50.23	50.23
KRH30918	Soybean	mitochondrion	49.54	49.89
KRH17309	Soybean	cytosol, mitochondrion	49.77	49.66
KRG97963	Soybean	mitochondrion	48.63	49.42
GSMUA_Achr11P...	Banana	mitochondrion	45.43	46.82
GSMUA_Achr6P02470_001	Banana	mitochondrion	40.18	46.32
GSMUA_Achr7P18640_001	Banana	mitochondrion	39.73	45.91
GSMUA_Achr6P11310_001	Banana	cytosol	39.27	45.26
GSMUA_Achr10P...	Banana	cytosol	37.9	44.15
Zm00001d017976_P001	Maize	mitochondrion	45.21	43.81
TraesCS7B01G105600.1	Wheat	mitochondrion	44.06	43.27
TraesCS7D01G201600.1	Wheat	mitochondrion	43.61	43.21
TraesCS4B01G228700.1	Wheat	mitochondrion	42.24	42.05
Os03t0240600-01	Rice	plastid	42.69	42.02
Os06t0248500-00	Rice	mitochondrion	43.38	41.94
TraesCS6B01G342800.1	Wheat	mitochondrion	43.38	41.85
TraesCS4D01G229900.1	Wheat	mitochondrion	41.78	41.59
TraesCS6A01G312600.1	Wheat	mitochondrion	43.15	41.54
EER92576	Sorghum	mitochondrion	42.92	41.41
Zm00001d028374_P001	Maize	mitochondrion	42.24	41.39
HORVU4Hr1G064070.1	Barley	mitochondrion	41.55	41.36
EES05563	Sorghum	mitochondrion	43.61	41.34
TraesCS6D01G292200.1	Wheat	mitochondrion	42.69	41.19
Zm00001d044734_P001	Maize	mitochondrion	41.1	40.72
KXG19704	Sorghum	mitochondrion	42.47	40.52
Os02t0738200-01	Rice	mitochondrion	41.78	40.13
GSMUA_Achr3P02030_001	Banana	plastid	37.67	39.38
HORVU7Hr1G040790.2	Barley	plastid	43.38	38.93
HORVU6Hr1G077120.1	Barley	plastid	43.61	37.3
KRH72180	Soybean	cytosol	18.95	35.78
TraesCS5A01G088600.1	Wheat	cytosol	26.71	34.21
KRH26691	Soybean	cytosol	30.14	34.11
KRH22633	Soybean	cytosol, nucleus	31.05	33.75
KRG96257	Soybean	cytosol	31.51	32.94
KRH35744	Soybean	cytosol	31.51	32.94
KRG96268	Soybean	cytosol	31.28	32.7
KRH72176	Soybean	cytosol	31.05	32.54
Zm00001d030251_P001	Maize	cytosol	32.88	32.43
KRH68014	Soybean	cytosol	31.05	32.38
KRH32856	Soybean	cytosol	31.05	32.38
KRH70657	Soybean	cytosol	30.59	32.29
KRH50316	Soybean	cytosol, plasma membrane, plastid	30.37	32.13
KRH68013	Soybean	cytosol	21.46	31.76
KRH25324	Soybean	cytosol	25.11	30.3
KRH22634	Soybean	cytosol	28.54	29.62
KRH26690	Soybean	cytosol	28.54	29.27
KXG38738	Sorghum	plastid	32.88	29.15
KRH25323	Soybean	cytosol	26.03	28.22
KRG88869	Soybean	cytosol	26.71	28.06
KRH53869	Soybean	cytosol	25.8	27.1
KRH59546	Soybean	cytosol	25.8	27.03
KRH43397	Soybean	cytosol	25.11	26.32
KRH64033	Soybean	cytosol	23.52	26.21
KRH53906	Soybean	cytosol	23.52	26.14
KRH40934	Soybean	cytosol	23.06	26.03
KRH59579	Soybean	cytosol	21.92	25.67
KRH36899	Soybean	cytosol	20.78	24.53
KRH58142	Soybean	cytosol	24.66	24.32
KRH77156	Soybean	cytosol	24.89	24.28
KRH61438	Soybean	cytosol	22.83	23.7
KRH08734	Soybean	mitochondrion	22.15	23.43
KRH52124	Soybean	cytosol	22.6	23.29
KRH55660	Soybean	cytosol	6.62	23.2
KRH05554	Soybean	cytosol	21.69	22.67
KRH70331	Soybean	mitochondrion	21.0	22.6
KRG88755	Soybean	cytosol	21.46	21.86
KRH28330	Soybean	plastid	25.34	21.6

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100817623	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02005905	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_09G172100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	UniProt:I1L423	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRH39018
ProteinID:KRH39018	ProteinID:KRH39018.1	PFAM:PF04564	PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0002338CFA	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:39684756..39686482

Molecular Weight (calculated)

49152.8 Da

IEP (calculated)

7.596

GRAVY (calculated)

-0.116

Length

438 amino acids

Sequence
(BLAST)

001: MVLGWRRRKG SNKNRRKGGK SIAELVTPNH FRCPISLDLM KDPVTLSTGI TYDRESVEMW FDEGNITCPV TNQVVRNFDM IPNHSLRVMI QDWCVENRQH
101: GVERIPTPRI PIGSIEVAEL LMLVKASSTD LDQYGCLELV QKLKRWGGES ERNKRCIVDN GAPVALASSF DAFANDSIER NVVLLEEILS ALNWMFPLQL
201: EAHKSLGSLA SLRCMVWFLK HQDLSGKEKS IVALKELLKF GDVKHLEALS QIEGVNELLV EFINKRISPT ITKASLSAVW YLVSSSSNSS DKMRLKFVEL
301: GLVSSLLDIL IDSDKSMCEK AVTILDSLCS SEEGRNKACG NDLTIPLLVK KILRVSPLTT DYSVSAIWKL CKFGEKDEGR TLVEALQVGA FQKLLLVLQV
401: GCGDETKEKA TELLKLLNPY RAELECIDSD YKNVKRSF

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.