CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97963	Soybean	mitochondrion	91.49	92.34
KRH72959	Soybean	cytosol, mitochondrion	66.21	65.75
KRH17309	Soybean	cytosol, mitochondrion	65.98	65.38
KRH39018	Soybean	mitochondrion	49.89	49.54
KRH48691	Soybean	cytosol	49.43	49.2
PGSC0003DMT400073836	Potato	cytosol	46.44	48.21
GSMUA_Achr10P...	Banana	cytosol	41.15	47.61
Solyc11g006030.1.1	Tomato	cytosol	46.9	47.44
CDY16432	Canola	cytosol	46.44	47.2
Bra039752.1-P	Field mustard	cytosol	45.29	46.68
GSMUA_Achr6P11310_001	Banana	cytosol	40.46	46.32
AT1G66160.1	Thale cress	cytosol	45.75	46.17
CDY50319	Canola	cytosol	45.29	46.14
GSMUA_Achr11P...	Banana	mitochondrion	45.06	46.12
GSMUA_Achr7P18640_001	Banana	mitochondrion	40.0	45.91
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	45.75	45.75
Bra025442.1-P	Field mustard	mitochondrion	45.06	44.75
CDX99694	Canola	mitochondrion	45.06	44.75
CDY27655	Canola	mitochondrion	44.83	44.52
GSMUA_Achr6P02470_001	Banana	mitochondrion	38.85	44.47
TraesCS6A01G312600.1	Wheat	mitochondrion	42.99	41.1
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	34.71	41.03
TraesCS6D01G292200.1	Wheat	mitochondrion	42.76	40.97
GSMUA_Achr3P02030_001	Banana	plastid	39.31	40.81
TraesCS6B01G342800.1	Wheat	mitochondrion	42.53	40.75
Os03t0240600-01	Rice	plastid	41.38	40.45
TraesCS7D01G201600.1	Wheat	mitochondrion	40.92	40.27
Zm00001d017976_P001	Maize	mitochondrion	41.84	40.27
TraesCS4D01G229900.1	Wheat	mitochondrion	40.69	40.23
TraesCS4B01G228700.1	Wheat	mitochondrion	40.69	40.23
CDX92016	Canola	mitochondrion	34.02	40.22
Os06t0248500-00	Rice	mitochondrion	41.84	40.18
Zm00001d044734_P001	Maize	mitochondrion	40.69	40.05
TraesCS7B01G105600.1	Wheat	mitochondrion	40.92	39.91
EER92576	Sorghum	mitochondrion	41.61	39.87
HORVU4Hr1G064070.1	Barley	mitochondrion	40.23	39.77
Bra001067.1-P	Field mustard	mitochondrion	33.56	39.67
KXG19704	Sorghum	mitochondrion	41.61	39.43
Zm00001d028374_P001	Maize	mitochondrion	40.46	39.37
Os02t0738200-01	Rice	mitochondrion	40.46	38.6
EES05563	Sorghum	mitochondrion	40.92	38.53
AT3G02840.1	Thale cress	mitochondrion	33.33	38.26
CDY28714	Canola	mitochondrion	32.18	37.33
HORVU6Hr1G077120.1	Barley	plastid	43.91	37.3
Bra040605.1-P	Field mustard	mitochondrion	31.95	37.07
HORVU7Hr1G040790.2	Barley	plastid	40.92	36.48
CDY51529	Canola	mitochondrion	31.26	36.27
KRH26691	Soybean	cytosol	31.72	35.66
KRH22633	Soybean	cytosol, nucleus	32.41	34.99
KRH72180	Soybean	cytosol	18.62	34.91
Zm00001d030251_P001	Maize	cytosol	34.02	33.33
KRH35744	Soybean	cytosol	31.95	33.17
TraesCS5A01G088600.1	Wheat	cytosol	25.98	33.04
KRG96257	Soybean	cytosol	31.72	32.94
KRH68014	Soybean	cytosol	31.72	32.86
KRG96268	Soybean	cytosol	31.49	32.7
KRH72176	Soybean	cytosol	31.03	32.3
KRH70657	Soybean	cytosol	30.8	32.29
KRH50316	Soybean	cytosol, plasma membrane, plastid	30.57	32.13
KRH32856	Soybean	cytosol	30.8	31.9
KRH68013	Soybean	cytosol	20.69	30.41
KRH25324	Soybean	cytosol	25.29	30.3
KXG38738	Sorghum	plastid	34.02	29.96
KRG88869	Soybean	cytosol	27.36	28.54
KRH26690	Soybean	cytosol	27.82	28.34
KRH22634	Soybean	cytosol	27.13	27.96
KRH25323	Soybean	cytosol	25.52	27.48
KRH53869	Soybean	cytosol	24.6	25.66
KRH55660	Soybean	cytosol	7.36	25.6
KRH59579	Soybean	cytosol	21.84	25.4
KRH53906	Soybean	cytosol	22.99	25.38
KRH64033	Soybean	cytosol	22.76	25.19
KRH40934	Soybean	cytosol	21.84	24.48
KRH43397	Soybean	cytosol	23.22	24.16
KRH36899	Soybean	cytosol	20.23	23.72
KRH59546	Soybean	cytosol	22.53	23.45
KRH58142	Soybean	cytosol	22.53	22.07
KRH05554	Soybean	cytosol	21.15	21.96
KRH52124	Soybean	cytosol	21.38	21.88
KRH61438	Soybean	cytosol	20.92	21.56
KRG88755	Soybean	cytosol	20.92	21.16
KRH77156	Soybean	cytosol	21.61	20.94
KRH08734	Soybean	mitochondrion	19.77	20.77
KRH70331	Soybean	mitochondrion	18.85	20.15
KRH28330	Soybean	plastid	21.38	18.09

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EMBL:ACUP02007100	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_11G214500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
UniProt:I1LMA2	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KRH30918	ProteinID:KRH30918
ProteinID:KRH30918.1	PFAM:PF04564	PFscan:PS51698	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000233CFC4	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:+:30799120..30800854

Molecular Weight (calculated)

48245.9 Da

IEP (calculated)

7.657

GRAVY (calculated)

0.049

Length

435 amino acids

Sequence
(BLAST)

001: MVLSWTRRNV FRRAKKEKEQ SQLLEVEVVI PNHFRCPVSL ELMTDPVTLS TGITYDRVSI EKWIEGENRT CPVTNQVLTT FDLIPNHAIR MMIQDWCVQN
101: SSYGIERIPT PRIPISSYEV SDTCTRILSA CQRGDNERCQ ELVGKIKVWG RESERNKRCI VGAGAGAVLA YAFDCFSSNS IDKHVVVLEE VLEVMTWMIP
201: FGEEGVSKLS SRASLNSLVW FLEGKDLASR QSAALLLKEV CVQELAKVGN VVEALVKMLR EPIGSSTSTK ACLATIFNLV SSAAANREGI VQRFVELGLV
301: SLLLEAIVDG EKGVCEKALG VLDCICDCQK GKEVVESNAL ALPLVVKKLL RVSPLASSFA VSILRKICDK REEGVLVEAL QVGVFQKLLV MLQVGCDEST
401: KENATRLLKL LNGYRNKAEC TDSSSLDFKH LKKPF

Best Arabidopsis Sequence Match ( AT5G37490.1 )
(BLAST)

001: MGFLWRTRSN EKKITPVLSW PESEPESEIT IPPEFQCPIS IDLMKDPVII STGITYDRVS IETWINSGNK TCPVTNTVLT TFDQIPNHTI RKMIQGWCVE
101: KGSPLIQRIP TPRVPLMPCE VYEISRKLSS ATRRGDYEKC GVIIEKIKKL GDESEKNRKC VNENSVGWVL CDCFDKFSGD EKLTFMLNEI LSLLTWMFPI
201: GLEGISKLAS ATSFRCVAGL LKSTDDSVRQ NAAFIMKEIL SLDETRVHSF AVENGVAEAL VKLIRDSVSS SSTKSSLIAI YQMVLQKPEI ASEFLEIGLV
301: SITVEMIVDA ENSVCEKALA VLDAICETEH GREEVRKNAL VMPLLVKKIA KVSELATRSS MSMILKLWKT GNTVAVEDAV RLGAFQKVLL VLQVGYGEET
401: KEKATELLKM MNTQMKLMSD CVDSLKEFKY IKKPF

Arabidopsis Description

PUB21U-box domain-containing protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5PNY6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.