CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	96.2	96.2
CDY28714	Canola	mitochondrion	83.15	81.6
CDY51529	Canola	mitochondrion	82.07	80.53
AT3G02840.1	Thale cress	mitochondrion	77.45	75.2
KRG97963	Soybean	mitochondrion	40.22	34.34
KRH30918	Soybean	mitochondrion	40.22	34.02
KRH72959	Soybean	cytosol, mitochondrion	40.22	33.79
KRH17309	Soybean	cytosol, mitochondrion	39.67	33.26
PGSC0003DMT400073836	Potato	cytosol	36.68	32.22
CDY16432	Canola	cytosol	37.23	32.01
CDY50319	Canola	cytosol	36.96	31.85
Solyc11g006030.1.1	Tomato	cytosol	36.41	31.16
GSMUA_Achr10P...	Banana	cytosol	31.79	31.12
CDY27655	Canola	mitochondrion	36.41	30.59
CDX99694	Canola	mitochondrion	36.41	30.59
GSMUA_Achr11P...	Banana	mitochondrion	35.05	30.35
GSMUA_Achr6P11310_001	Banana	cytosol	30.71	29.74
Os06t0248500-00	Rice	mitochondrion	34.78	28.26
Zm00001d044734_P001	Maize	mitochondrion	33.7	28.05
GSMUA_Achr6P02470_001	Banana	mitochondrion	28.8	27.89
Zm00001d017976_P001	Maize	mitochondrion	34.24	27.88
TraesCS7B01G105600.1	Wheat	mitochondrion	33.7	27.8
Os02t0738200-01	Rice	mitochondrion	33.97	27.41
TraesCS4D01G229900.1	Wheat	mitochondrion	32.61	27.27
TraesCS6A01G312600.1	Wheat	mitochondrion	33.7	27.25
TraesCS7D01G201600.1	Wheat	mitochondrion	32.61	27.15
GSMUA_Achr7P18640_001	Banana	mitochondrion	27.72	26.91
TraesCS6D01G292200.1	Wheat	mitochondrion	32.88	26.65
TraesCS6B01G342800.1	Wheat	mitochondrion	32.88	26.65
EES05563	Sorghum	mitochondrion	33.42	26.62
KXG19704	Sorghum	mitochondrion	33.15	26.58
EER92576	Sorghum	mitochondrion	32.61	26.43
Zm00001d028374_P001	Maize	mitochondrion	31.79	26.17
HORVU4Hr1G064070.1	Barley	mitochondrion	31.25	26.14
GSMUA_Achr3P02030_001	Banana	plastid	29.62	26.01
TraesCS4B01G228700.1	Wheat	mitochondrion	30.98	25.91
Os03t0240600-01	Rice	plastid	30.71	25.39
HORVU7Hr1G040790.2	Barley	plastid	33.15	25.0
HORVU6Hr1G077120.1	Barley	plastid	33.7	24.22
CDX75084	Canola	cytosol	26.63	24.14
Zm00001d030251_P001	Maize	cytosol	28.8	23.87
CDX84168	Canola	cytosol	26.09	23.65
CDX84587	Canola	cytosol	26.09	23.47
CDY40422	Canola	cytosol	26.09	23.3
CDX79645	Canola	cytosol	25.82	23.28
CDY23218	Canola	cytosol	25.0	23.23
CDX95337	Canola	cytosol	25.82	23.23
CDY32070	Canola	cytosol	25.82	23.06
CDY59599	Canola	cytosol	25.27	22.74
CDX78096	Canola	cytosol	23.37	22.11
KXG38738	Sorghum	plastid	29.35	21.86
CDX99233	Canola	cytosol, peroxisome, plastid	23.37	20.43
CDX95458	Canola	cytosol	22.55	19.9
CDY50158	Canola	cytosol	22.55	19.9
TraesCS5A01G088600.1	Wheat	cytosol	18.48	19.88
CDX92328	Canola	cytosol	22.83	19.86
CDX84538	Canola	cytosol	22.55	19.81
CDY16513	Canola	cytosol	22.55	19.62
CDY08864	Canola	cytosol	22.28	19.57
CDY47911	Canola	cytosol	22.28	19.43
CDY59286	Canola	cytosol	22.28	19.39
CDX92262	Canola	cytosol	21.74	19.37
CDY01063	Canola	cytosol	23.1	19.32
CDY53920	Canola	cytosol	22.55	19.04
CDY08490	Canola	cytosol	22.83	19.0
CDX99325	Canola	cytosol	21.74	18.91
CDX82332	Canola	cytosol	21.74	18.87
CDY67531	Canola	cytosol	22.55	18.57
CDX75980	Canola	cytosol	21.2	18.4
CDX73849	Canola	cytosol	23.1	18.2
CDX83098	Canola	cytosol	20.65	17.16
CDY53333	Canola	cytosol	20.65	17.0
CDY18670	Canola	cytosol	20.38	16.93
CDY69247	Canola	cytosol	20.38	16.93
CDY71041	Canola	cytosol	18.48	16.46

Protein Annotations

EnsemblPlants:CDX92016	EnsemblPlantsGene:GSBRNA2T00153673001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	ncoils:Coil	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61	ProteinID:CDX92016
ProteinID:CDX92016.1	SUPFAM:SSF48371	UniParc:UPI0004EB1E60	MapMan:35.1	:	:

Description

BnaC03g33180D

Coordinates

chrLK031870:+:1258552..1259658

Molecular Weight (calculated)

41327.5 Da

IEP (calculated)

9.261

GRAVY (calculated)

-0.146

Length

368 amino acids

Sequence
(BLAST)

001: MVLPWRSRGG KRPNQLTISD AETKTPAAQL RSSRIERVQS PRVPLTPRAA AEICRRLENA TAREEHAECF EIVSKIKNLA RERGETNKKC LLQNGVVSAL
101: TSCFQRFTST REEQARLLEE VLSVLTYWLP LSRTEGFSKM GTTASLNRLV RFLNATDAKT RQNAALCIRE VLAVDKKYVY ALTDIEGACE GLVKIISDSV
201: STKASLMAIY RAVSCDNEIA AKFVKLGLVA LIAEMIMNNA EKSVCERCLV VLNVICDNEQ GREDVLRNAL IVPLLVKKIL RVSDLATQCS VSILWKLWRK
301: NGEDHVLLEA LQVGAFEKLL VVLQVGCEEK TKERASELLR NLNRCRNEIE KTNCLDSSMR LKNVKKSF

Best Arabidopsis Sequence Match ( AT3G02840.1 )
(BLAST)

001: MVLPWRSRGG VAKRRNQLIS GDISVVETKI PVQLRSPSRI ERIQSPRVLL TPRDAVEISR RLQNAAAREE YAECLEIVSK IKNLGRGGDT NKKCLVQNGS
101: VLALSSCFER FAAARDGHMR LLEEILFVLS SWLPLNRSEG FNKMGSTASL NCLVRFLNGK DAKTRQNAAF CIREVIAVDK RYVYALTDVE GACEGLVKII
201: RDSVSTSSTK ASLMVIYRAI SSNDKITEKF VKLGLVELIT EMMVNNAEKS VCERSLVVLN ATCDNEQGKE DVLRNALIVP LLVKKILRVS DLATQCSVSI
301: LWKLWKNKKD GECDDRLLVE ALQVGAFEKL LVLLQVGCED KTKEKASELL RNLNRCRNEI EKTNCVDSSM HLKNVKKSF

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M8S5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.