Factsheet for AT3G02840.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040605.1-P	Field mustard	mitochondrion	77.04	77.87
CDX92016	Canola	mitochondrion	75.2	77.45
CDX74232	Canola	cytosol, extracellular, mitochondrion, plastid	74.93	77.17
CDY51529	Canola	mitochondrion	75.99	76.8
Bra001067.1-P	Field mustard	mitochondrion	74.41	76.63
CDY28714	Canola	mitochondrion	75.46	76.27
KRH72959	Soybean	cytosol, mitochondrion	40.11	34.7
KRH17309	Soybean	cytosol, mitochondrion	39.58	34.17
AT5G37490.1	Thale cress	cytosol, nucleus, peroxisome	38.79	33.79
KRG97963	Soybean	mitochondrion	38.26	33.64
KRH30918	Soybean	mitochondrion	38.26	33.33
AT1G66160.1	Thale cress	cytosol	37.73	33.18
PGSC0003DMT400073836	Potato	cytosol	35.88	32.46
Solyc11g006030.1.1	Tomato	cytosol	35.88	31.63
GSMUA_Achr11P...	Banana	mitochondrion	35.09	31.29
GSMUA_Achr10P...	Banana	cytosol	30.61	30.85
GSMUA_Achr6P11310_001	Banana	cytosol	30.08	30.0
Zm00001d017976_P001	Maize	mitochondrion	35.62	29.87
Os06t0248500-00	Rice	mitochondrion	34.83	29.14
Os02t0738200-01	Rice	mitochondrion	34.3	28.51
Zm00001d044734_P001	Maize	mitochondrion	33.25	28.51
TraesCS7B01G105600.1	Wheat	mitochondrion	33.51	28.48
TraesCS6A01G312600.1	Wheat	mitochondrion	34.04	28.35
TraesCS6B01G342800.1	Wheat	mitochondrion	33.77	28.19
GSMUA_Achr6P02470_001	Banana	mitochondrion	28.23	28.16
TraesCS7D01G201600.1	Wheat	mitochondrion	32.72	28.05
TraesCS4D01G229900.1	Wheat	mitochondrion	32.45	27.95
EES05563	Sorghum	mitochondrion	34.04	27.92
EER92576	Sorghum	mitochondrion	33.25	27.75
TraesCS6D01G292200.1	Wheat	mitochondrion	33.25	27.75
Zm00001d028374_P001	Maize	mitochondrion	32.45	27.52
GSMUA_Achr7P18640_001	Banana	mitochondrion	27.44	27.44
TraesCS4B01G228700.1	Wheat	mitochondrion	31.66	27.27
HORVU4Hr1G064070.1	Barley	mitochondrion	31.13	26.82
KXG19704	Sorghum	mitochondrion	32.45	26.8
GSMUA_Achr3P02030_001	Banana	plastid	29.55	26.73
Os03t0240600-01	Rice	plastid	31.13	26.52
HORVU7Hr1G040790.2	Barley	plastid	32.98	25.61
HORVU6Hr1G077120.1	Barley	plastid	34.3	25.39
Zm00001d030251_P001	Maize	cytosol	28.76	24.55
KXG38738	Sorghum	plastid	29.82	22.87
AT2G35930.1	Thale cress	cytosol	24.54	22.63
AT3G52450.1	Thale cress	cytosol	24.27	21.15
AT3G19380.1	Thale cress	cytosol, golgi, plastid	22.69	20.43
AT5G64660.1	Thale cress	cytosol	22.43	20.24
AT5G09800.1	Thale cress	cytosol	21.64	20.05
AT1G49780.1	Thale cress	cytoskeleton, cytosol, vacuole	21.9	19.71
TraesCS5A01G088600.1	Wheat	cytosol	17.68	19.59
AT3G18710.1	Thale cress	cytosol	20.58	18.8
AT3G49810.1	Thale cress	cytosol	22.16	18.75
AT3G11840.1	Thale cress	cytosol	22.43	18.64
AT5G65920.1	Thale cress	cytosol	20.84	17.79

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	EntrezGene:821225	ProteinID:AAF26976.1	ProteinID:AEE73865.1	EMBL:AK118550
InterPro:ARM-like	InterPro:ARM-type_fold	ArrayExpress:AT3G02840	EnsemblPlantsGene:AT3G02840	RefSeq:AT3G02840	TAIR:AT3G02840
RefSeq:AT3G02840-TAIR-G	EnsemblPlants:AT3G02840.1	TAIR:AT3G02840.1	Unigene:At.41071	EMBL:BT002533	EMBL:BT008474
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0010193	InterPro:IPR011989
RefSeq:NP_566184.1	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR22849	PANTHER:PTHR22849:SF61	UniProt:Q9M8S5	SUPFAM:SSF48371
UniParc:UPI00000AC149	:	:	:	:	:

Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M8S5]

Coordinates

chr3:+:618398..619686

Molecular Weight (calculated)

42447.9 Da

IEP (calculated)

9.498

GRAVY (calculated)

-0.147

Length

379 amino acids

Sequence
(BLAST)

001: MVLPWRSRGG VAKRRNQLIS GDISVVETKI PVQLRSPSRI ERIQSPRVLL TPRDAVEISR RLQNAAAREE YAECLEIVSK IKNLGRGGDT NKKCLVQNGS
101: VLALSSCFER FAAARDGHMR LLEEILFVLS SWLPLNRSEG FNKMGSTASL NCLVRFLNGK DAKTRQNAAF CIREVIAVDK RYVYALTDVE GACEGLVKII
201: RDSVSTSSTK ASLMVIYRAI SSNDKITEKF VKLGLVELIT EMMVNNAEKS VCERSLVVLN ATCDNEQGKE DVLRNALIVP LLVKKILRVS DLATQCSVSI
301: LWKLWKNKKD GECDDRLLVE ALQVGAFEKL LVLLQVGCED KTKEKASELL RNLNRCRNEI EKTNCVDSSM HLKNVKKSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.