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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • extracellular 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001067.1-P Field mustard mitochondrion 97.01 97.01
CDX92016 Canola mitochondrion 96.2 96.2
CDY28714 Canola mitochondrion 80.98 79.47
CDY51529 Canola mitochondrion 79.89 78.4
AT3G02840.1 Thale cress mitochondrion 77.17 74.93
KRG97963 Soybean mitochondrion 41.03 35.03
KRH30918 Soybean mitochondrion 41.03 34.71
KRH72959 Soybean cytosol, mitochondrion 39.95 33.56
KRH17309 Soybean cytosol, mitochondrion 39.4 33.03
CDY50319 Canola cytosol 37.23 32.08
CDY16432 Canola cytosol 37.23 32.01
PGSC0003DMT400073836 Potato cytosol 36.14 31.74
CDY27655 Canola mitochondrion 36.68 30.82
CDX99694 Canola mitochondrion 36.68 30.82
Solyc11g006030.1.1 Tomato cytosol 35.87 30.7
GSMUA_Achr10P... Banana cytosol 31.25 30.59
GSMUA_Achr11P... Banana mitochondrion 35.05 30.35
GSMUA_Achr6P11310_001 Banana cytosol 30.16 29.21
Os06t0248500-00 Rice mitochondrion 34.51 28.04
Zm00001d017976_P001 Maize mitochondrion 34.24 27.88
Zm00001d044734_P001 Maize mitochondrion 33.42 27.83
TraesCS7B01G105600.1 Wheat mitochondrion 33.42 27.58
TraesCS4D01G229900.1 Wheat mitochondrion 32.88 27.5
GSMUA_Achr6P02470_001 Banana mitochondrion 28.26 27.37
TraesCS7D01G201600.1 Wheat mitochondrion 32.61 27.15
TraesCS6A01G312600.1 Wheat mitochondrion 33.15 26.81
Os02t0738200-01 Rice mitochondrion 33.15 26.75
EES05563 Sorghum mitochondrion 33.42 26.62
HORVU4Hr1G064070.1 Barley mitochondrion 31.79 26.59
EER92576 Sorghum mitochondrion 32.61 26.43
Zm00001d028374_P001 Maize mitochondrion 32.07 26.4
GSMUA_Achr7P18640_001 Banana mitochondrion 27.17 26.39
KXG19704 Sorghum mitochondrion 32.88 26.36
TraesCS6B01G342800.1 Wheat mitochondrion 32.34 26.21
TraesCS6D01G292200.1 Wheat mitochondrion 32.34 26.21
GSMUA_Achr3P02030_001 Banana plastid 29.62 26.01
TraesCS4B01G228700.1 Wheat mitochondrion 30.98 25.91
Os03t0240600-01 Rice plastid 30.71 25.39
HORVU7Hr1G040790.2 Barley plastid 32.88 24.8
CDX75084 Canola cytosol 26.9 24.38
Zm00001d030251_P001 Maize cytosol 29.08 24.1
CDX84168 Canola cytosol 26.36 23.89
HORVU6Hr1G077120.1 Barley plastid 33.15 23.83
CDX84587 Canola cytosol 26.36 23.72
CDY40422 Canola cytosol 26.09 23.3
CDX79645 Canola cytosol 25.82 23.28
CDY32070 Canola cytosol 25.82 23.06
CDY59599 Canola cytosol 25.54 22.98
CDX95337 Canola cytosol 25.54 22.98
CDY23218 Canola cytosol 24.73 22.98
CDX78096 Canola cytosol 23.37 22.11
KXG38738 Sorghum plastid 29.62 22.06
CDX99233 Canola cytosol, peroxisome, plastid 23.91 20.9
CDY50158 Canola cytosol 23.1 20.38
CDX95458 Canola cytosol 23.1 20.38
CDX92328 Canola cytosol 23.37 20.33
CDY16513 Canola cytosol 23.1 20.09
CDY59286 Canola cytosol 22.83 19.86
TraesCS5A01G088600.1 Wheat cytosol 17.93 19.3
CDY53920 Canola cytosol 22.83 19.27
CDX92262 Canola cytosol 21.47 19.13
CDX84538 Canola cytosol 21.74 19.09
CDY01063 Canola cytosol 22.83 19.09
CDY47911 Canola cytosol 21.74 18.96
CDY08864 Canola cytosol 21.47 18.85
CDY08490 Canola cytosol 22.55 18.78
CDX99325 Canola cytosol 21.47 18.68
CDY67531 Canola cytosol 22.28 18.34
CDX82332 Canola cytosol 20.92 18.16
CDX73849 Canola cytosol 22.83 17.99
CDX75980 Canola cytosol 20.38 17.69
CDX83098 Canola cytosol 20.65 17.16
CDY53333 Canola cytosol 20.65 17.0
CDY69247 Canola cytosol 20.38 16.93
CDY18670 Canola cytosol 20.38 16.93
CDY71041 Canola cytosol 17.93 15.98
Protein Annotations
EnsemblPlants:CDX74232EnsemblPlantsGene:GSBRNA2T00112013001Gene3D:1.25.10.10GO:GO:0003674GO:GO:0005488InterPro:ARM-like
InterPro:ARM-type_foldInterPro:IPR011989ncoils:CoilPANTHER:PTHR22849PANTHER:PTHR22849:SF61ProteinID:CDX74232
ProteinID:CDX74232.1SUPFAM:SSF48371UniParc:UPI0004EE220FMapMan:35.1::
Description
BnaA03g28150D
Coordinates
chrLK031800:-:1896018..1898227
Molecular Weight (calculated)
41232.5 Da
IEP (calculated)
9.658
GRAVY (calculated)
-0.130
Length
368 amino acids
Sequence
(BLAST)
001: MVLPWRSRGG KRPNQLTISD AETKTPAAQL RSSRIERIQS PRVPLTPRAA STICRRLENA TAREEHVECF KIVSKIKNLV RESGETNKKC LLQNGVVSAL
101: TSCFQRFSST REEQARLLEE VLSVLTYWLP LSGTEGFSKM GTTASLNRLV RFLNATDAKT RQNAALCIRE VLAVDKKYVY ALTDIEGACE GLVKTIRDSV
201: STKASLMAIY RAVSCDDKIA AKFVKLGLVA LIAEMIMNNA EKSVCERCLV VLNVICDNEQ GREDVLRNAL IVPLLVKKIL RVSDLATQCS VSILWKLWRK
301: SGEDHVLLEA LQVGAFEKLL VVLQVGCEEK TKERASELLR NLNRCRNEIE KTNCLDSSMR LKNVKKSF
Best Arabidopsis Sequence Match ( AT3G02840.1 )
(BLAST)
001: MVLPWRSRGG VAKRRNQLIS GDISVVETKI PVQLRSPSRI ERIQSPRVLL TPRDAVEISR RLQNAAAREE YAECLEIVSK IKNLGRGGDT NKKCLVQNGS
101: VLALSSCFER FAAARDGHMR LLEEILFVLS SWLPLNRSEG FNKMGSTASL NCLVRFLNGK DAKTRQNAAF CIREVIAVDK RYVYALTDVE GACEGLVKII
201: RDSVSTSSTK ASLMVIYRAI SSNDKITEKF VKLGLVELIT EMMVNNAEKS VCERSLVVLN ATCDNEQGKE DVLRNALIVP LLVKKILRVS DLATQCSVSI
301: LWKLWKNKKD GECDDRLLVE ALQVGAFEKL LVLLQVGCED KTKEKASELL RNLNRCRNEI EKTNCVDSSM HLKNVKKSF
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M8S5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.