Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038683.1-P | Field mustard | cytosol | 99.76 | 94.18 |
| CDY67531 | Canola | cytosol | 93.36 | 88.14 |
| CDY01063 | Canola | cytosol | 78.91 | 75.68 |
| CDY08490 | Canola | cytosol | 78.91 | 75.34 |
| CDY53920 | Canola | cytosol | 76.54 | 74.08 |
| AT3G11840.1 | Thale cress | cytosol | 78.67 | 72.81 |
| CDX73849 | Canola | cytosol | 79.38 | 71.73 |
| VIT_08s0105g00200.t01 | Wine grape | cytosol | 48.1 | 50.0 |
| KRH72180 | Soybean | cytosol | 25.83 | 46.98 |
| KRH68013 | Soybean | cytosol | 31.99 | 45.61 |
| GSMUA_Achr11P... | Banana | cytosol | 37.91 | 43.72 |
| CDX79645 | Canola | cytosol | 39.1 | 40.44 |
| PGSC0003DMT400054946 | Potato | cytosol | 40.28 | 40.38 |
| Solyc01g007050.1.1 | Tomato | cytosol | 40.28 | 40.38 |
| CDY40422 | Canola | cytosol | 39.34 | 40.29 |
| CDY32070 | Canola | cytosol | 39.1 | 40.05 |
| CDX84168 | Canola | cytosol | 38.39 | 39.9 |
| CDX84587 | Canola | cytosol | 38.63 | 39.85 |
| CDX75084 | Canola | cytosol | 38.15 | 39.66 |
| CDX95337 | Canola | cytosol | 36.97 | 38.14 |
| CDX78096 | Canola | cytosol | 34.83 | 37.79 |
| CDY23218 | Canola | cytosol | 35.31 | 37.63 |
| CDY59599 | Canola | cytosol | 36.26 | 37.41 |
| CDY50158 | Canola | cytosol | 25.12 | 25.42 |
| CDX95458 | Canola | cytosol | 24.88 | 25.18 |
| CDX99233 | Canola | cytosol, peroxisome, plastid | 25.12 | 25.18 |
| CDX92328 | Canola | cytosol | 25.12 | 25.06 |
| CDY59286 | Canola | cytosol | 24.64 | 24.59 |
| CDY16513 | Canola | cytosol | 24.64 | 24.59 |
| CDX99694 | Canola | mitochondrion | 25.12 | 24.2 |
| CDY50319 | Canola | cytosol | 24.41 | 24.12 |
| CDY16432 | Canola | cytosol | 24.41 | 24.07 |
| CDY27655 | Canola | mitochondrion | 24.88 | 23.97 |
| CDX92262 | Canola | cytosol | 22.75 | 23.24 |
| CDY08864 | Canola | cytosol | 22.75 | 22.91 |
| CDX75980 | Canola | cytosol | 22.99 | 22.88 |
| CDX84538 | Canola | cytosol | 22.51 | 22.67 |
| CDX92016 | Canola | mitochondrion | 19.43 | 22.28 |
| CDX82332 | Canola | cytosol | 22.27 | 22.17 |
| CDX99325 | Canola | cytosol | 21.8 | 21.75 |
| CDX74232 | Canola | cytosol, extracellular, mitochondrion, plastid | 18.96 | 21.74 |
| CDY28714 | Canola | mitochondrion | 18.96 | 21.33 |
| CDY71041 | Canola | cytosol | 20.85 | 21.31 |
| CDX83098 | Canola | cytosol | 22.27 | 21.22 |
| CDY53333 | Canola | cytosol | 22.27 | 21.03 |
| CDY51529 | Canola | mitochondrion | 18.48 | 20.8 |
| CDY69247 | Canola | cytosol | 20.14 | 19.19 |
| CDY18670 | Canola | cytosol | 19.91 | 18.96 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078IDD2 | UniProt:A0A078IDD2 | InterPro:ARM-like |
| InterPro:ARM-type_fold | EnsemblPlants:CDY47911 | ProteinID:CDY47911 | ProteinID:CDY47911.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00088429001 | InterPro:IPR003613 | InterPro:IPR011989 |
| InterPro:IPR013083 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF24 | SMART:SM00504 |
| SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE9368 | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng09430DRING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A078IDD2]
Coordinates
chrLK032744:+:110802..112496
Molecular Weight (calculated)
47252.6 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.052
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRVDEEIEI PNYFLCPISL EIMKDPVTAV SGITYDRQSI VQWLEKVPSC PVTKQHLPLD SDLTPNHTLR RLIQHWCVEN ATRGVARIPT PRAPPGKLNI
101: VEEIKNLKKF VVEASGREET LKKLEVLAME GETNRRMMCE AGVHRSLILF VVKCTREEEE EGQHLKGHLD ESLRLLHLIG VPLNDARALL IENDQMLESL
201: TLILHQQDFI NKAYTIVLLR NLTGNASSHI VESPSVSATL QPSSSSVRSK LDRSLVIKRG VTAALMILLE TSSWSRNRTI LVDLGAVSEL IELEISYSGE
301: KRTTELVLGI LSHLCCCADG RAEILAHGGG IAIVTKRVLW VSTAADDRAL SILSTLSKFS PENEVVEEMV CVGTVEKLCS VLRVDCGLSL KEKAKEILRD
401: HFDEWKRFPC INVHLHTKLL EQ
101: VEEIKNLKKF VVEASGREET LKKLEVLAME GETNRRMMCE AGVHRSLILF VVKCTREEEE EGQHLKGHLD ESLRLLHLIG VPLNDARALL IENDQMLESL
201: TLILHQQDFI NKAYTIVLLR NLTGNASSHI VESPSVSATL QPSSSSVRSK LDRSLVIKRG VTAALMILLE TSSWSRNRTI LVDLGAVSEL IELEISYSGE
301: KRTTELVLGI LSHLCCCADG RAEILAHGGG IAIVTKRVLW VSTAADDRAL SILSTLSKFS PENEVVEEMV CVGTVEKLCS VLRVDCGLSL KEKAKEILRD
401: HFDEWKRFPC INVHLHTKLL EQ
001: MDQEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQNI VKWLEKVPSC PVTKQPLPLD SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRVPPGKLNV
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
101: VEEIKNLKKF GQEALGREET LQKLEVLAMD GNNRRLMCEC GVHKSLILFV VKCTSEDEDG RRRIKGLDES LRLLHLIGIP SNDAKTILME NDRVMESLTW
201: VLHQEDFLSK AYTIVLLRNL TEYTSSHIVE RLNPEIFKGI IGFLKDVVNS VNRTSPTVRE TVQSSSRPSL GKTEPSKLDH SLVIKQAVTA ALMILLETSS
301: WSRNRSLLVD LGAVSELIEL EISYTGEKRI TELMLGVLSR LCCCANGRAE ILAHRGGIAV VTKRLLRVSP AADDRAISIL TTVSKFSPEN MVVEEMVNVG
401: TVEKLCSVLG MDCGLNLKEK AKEILKDHFD EWKKFPCIDI TLLTKLLSIS PKGPKI
Arabidopsis Description
PUB24E3 ubiquitin-protein ligase PUB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.